RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-205ENST00000472806 FAM89AQ96GI7 184 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 CNNM1Q9NRU3 951 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.97
CCDC171-205ENST00000472806 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 TPCN1Q9ULQ1 816 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 SPATA31A1Q5TZJ5 1347 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 MROH5Q6ZUA9 1318 aa9.02□□□□□ -0.97
CCDC171-205ENST00000472806 IRS4O14654 1257 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 CPA1P15085 419 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 ITGA6P23229 1130 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 HMGN5P82970 282 aaKnown RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 LDHAL6AQ6ZMR3 332 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 USP48Q86UV5 1035 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 GAS2L3Q86XJ1 694 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 APPBP2Q92624 585 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 EDC3Q96F86 508 aaKnown RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 TSPY26PQ9H489 355 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 ZNF652Q9Y2D9 606 aa9.01□□□□□ -0.97
CCDC171-205ENST00000472806 FCF1Q9Y324 198 aaKnown RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 CICQ96RK0 1608 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-205ENST00000472806 PHLPP1O60346 1717 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 DOT1LQ8TEK3 1739 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 NWD2Q9ULI1 1742 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 LARGE1O95461 756 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 CYP21A2P08686 494 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 FKBP4Q02790 459 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC171-205ENST00000472806 TOB2Q14106 344 aaPredicted RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 IMMTQ16891 758 aaKnown RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 WASHC4Q2M389 1173 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 UVSSAQ2YD98 709 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 HS1BP3Q53T59 392 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 Q6ZUG5 572 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 TTLL11Q8NHH1 800 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 GTF3C6Q969F1 213 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 PANK2Q9BZ23 570 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 PUS3Q9BZE2 481 aaKnown RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 SCAND2PQ9GZW5 306 aaPredicted RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 ZSCAN16Q9H4T2 348 aaPredicted RBP9□□□□□ -0.97
CCDC171-205ENST00000472806 AAASQ9NRG9 546 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 TMEM63CQ9P1W3 806 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 TBC1D2BQ9UPU7 963 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 ZBTB1Q9Y2K1 713 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 MAST3O60307 1309 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 ELP1O95163 1332 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 NRAPQ86VF7 1730 aa9□□□□□ -0.97
CCDC171-205ENST00000472806 SYCE3A1L190 88 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 H3BQV1 296 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 DHX16O60231 1041 aaKnown RBP8.99□□□□□ -0.97
CCDC171-205ENST00000472806 TOM1O60784 492 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 PFKFB2O60825 505 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 HSPD1P10809 573 aaKnown RBP8.99□□□□□ -0.97
CCDC171-205ENST00000472806 SLC5A1P13866 664 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 GPTP24298 496 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 PUM3Q15397 648 aaKnown RBP8.99□□□□□ -0.97
CCDC171-205ENST00000472806 HLFQ16534 295 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 ATL3Q6DD88 541 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 RNF19BQ6ZMZ0 732 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 CCDC129Q6ZRS4 1044 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 FBXL16Q8N461 479 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 NECAB1Q8N987 351 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 RGS22Q8NE09 1264 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 UTP14AQ9BVJ6 771 aaKnown RBP8.99□□□□□ -0.97
CCDC171-205ENST00000472806 CCDC9Q9Y3X0 531 aaKnown RBP8.99□□□□□ -0.97
CCDC171-205ENST00000472806 RIPOR2Q9Y4F9 1068 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 SPATA31A5Q5VU36 1347 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 SPATA31A7Q8IWB4 1347 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 RTL9Q8NET4 1388 aa8.99□□□□□ -0.97
CCDC171-205ENST00000472806 RIC1Q4ADV7 1423 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 MYH3P11055 1940 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 GOLGA6L4A6NEF3 574 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 FIBPO43427 364 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 PDE8BO95263 885 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 GCGRP47871 477 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 EIF5P55010 431 aaKnown RBP8.98□□□□□ -0.97
CCDC171-205ENST00000472806 UBE3CQ15386 1083 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 CCDC152Q4G0S7 254 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 LPIN2Q92539 896 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 ZNF274Q96GC6 653 aaPredicted RBP8.98□□□□□ -0.97
CCDC171-205ENST00000472806 AGXT2Q9BYV1 514 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 GREM2Q9H772 168 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 CFAP45Q9UL16 551 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 CNPY2Q9Y2B0 182 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 LRP5O75197 1615 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 LTBP4Q8N2S1 1624 aa8.98□□□□□ -0.97
CCDC171-205ENST00000472806 RREB1Q92766 1687 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 ATRNO75882 1429 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
CCDC171-205ENST00000472806 E7EWF7 191 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms