RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	CCDC196	A0A1B0GTZ2	297 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	FRMD3	A2A2Y4	597 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZNF213	O14771	459 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	CORO7	P57737	925 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	BICDL1	Q6ZP65	573 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	DHX32	Q7L7V1	743 aa	Known RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	TADA2B	Q86TJ2	420 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZCRB1	Q8TBF4	217 aa	Known RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	USP28	Q96RU2	1077 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	PES1	O00541	588 aa	Known RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	PLA2G4D	Q86XP0	818 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	TMOD3	Q9NYL9	352 aa		11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	TRMT112	Q9UI30	125 aa	Known RBP	11.16	□□□□□ -0.62
ZIC4-208	ENST00000472749	LMOD1	P29536	600 aa	Predicted RBP	11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	NBPF20	Q3BBV1	942 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	DCAF5	Q96JK2	942 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	CEP89	Q96ST8	783 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	C19orf44	Q9H6X5	657 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	DDX19A	Q9NUU7	478 aa	Known RBP	11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	HMG20B	Q9P0W2	317 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	FAM208A	Q9UK61	1670 aa	Known RBP	11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	FMN2	Q9NZ56	1722 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	MINDY4B	A8MYZ0	360 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	ZAP70	P43403	619 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	ATP2B2	Q01814	1243 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	PDIA6	Q15084	440 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	SLC9C2	Q5TAH2	1124 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	SUGP1	Q8IWZ8	645 aa	Known RBP	11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	PHKB	Q93100	1093 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	INCENP	Q9NQS7	918 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	NALCN	Q8IZF0	1738 aa		11.15	□□□□□ -0.62
ZIC4-208	ENST00000472749	CACNA1F	O60840	1977 aa		11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	PRC1	O43663	620 aa		11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	NRDC	O43847	1150 aa		11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	SWT1	Q5T5J6	900 aa	Known RBP	11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	CMTR1	Q8N1G2	835 aa	Known RBP	11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	KBTBD3	Q8NAB2	608 aa		11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	FAN1	Q9Y2M0	1017 aa		11.15	□□□□□ -0.63
ZIC4-208	ENST00000472749	NWD1	Q149M9	1564 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749		E7EWF7	191 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	SERPINC1	P01008	464 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	ATP5J	P18859	108 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	WWC2	Q6AWC2	1192 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	PXDN	Q92626	1479 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	N4BP1	O75113	896 aa	Known RBP	11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	PAX7	P23759	505 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	CPLX2	Q6PUV4	134 aa	Known RBP	11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	CEP57L1	Q8IYX8	460 aa		11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.14	□□□□□ -0.63
ZIC4-208	ENST00000472749	HSPD1	P10809	573 aa	Known RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	RDX	P35241	583 aa	Known RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	HSP90B2P	Q58FF3	399 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	TMC6	Q7Z403	805 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	DNAJC10	Q8IXB1	793 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	EFCAB13	Q8IY85	973 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	KCNB2	Q92953	911 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	AIFM3	Q96NN9	605 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	CLSTN2	Q9H4D0	955 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	STOX1	Q6ZVD7	989 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	AIDA	Q96BJ3	306 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	XAGE2	Q96GT9	111 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	PPP1R13B	Q96KQ4	1090 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	TOPAZ1	Q8N9V7	1692 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	hCG_1642624	A0A1W2PR95	340 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	RNF113A	O15541	343 aa	Known RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	NEMF	O60524	1076 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	HNRNPH1	P31943	449 aa	Known RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	SSR1	P43307	286 aa	Known RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	PLBD2	Q8NHP8	589 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	ACSBG1	Q96GR2	724 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	JAG2	Q9Y219	1238 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	ELP1	O95163	1332 aa		11.13	□□□□□ -0.63
ZIC4-208	ENST00000472749	EYA2	O00167	538 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	USP8	P40818	1118 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	IL15	P40933	162 aa	Predicted RBP	11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	CCZ1B	P86790	482 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	CCZ1	P86791	482 aa	Predicted RBP	11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	KLHL10	Q6JEL2	608 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	VPS37D	Q86XT2	251 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	MIGA1	Q8NAN2	632 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	MPHOSPH8	Q99549	860 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	ADD1	P35611	737 aa	Known RBP	11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	RASSF8	Q8NHQ8	419 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	N4BP2L2	Q92802	583 aa	Predicted RBP	11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	CENPH	Q9H3R5	247 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	L2HGDH	Q9H9P8	463 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749		B4E1Z4	1266 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749		M0R2C6	588 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	LONRF2	Q1L5Z9	754 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	CFAP100	Q494V2	611 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	MAP9	Q49MG5	647 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	KAT2B	Q92831	832 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	OSBP2	Q969R2	916 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	PARD6B	Q9BYG5	372 aa		11.12	□□□□□ -0.63
ZIC4-208	ENST00000472749	NAT10	Q9H0A0	1025 aa	Known RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms