RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 USP40Q9NVE5 1235 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
SCAMP3-205ENST00000472397 PDHXO00330 501 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 IFIT1P09914 478 aaKnown RBP12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 CYP2C8P10632 490 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 FGFR2P21802 821 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 PRDX5P30044 214 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 FXR1P51114 621 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 PPIL2Q13356 520 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 DPF3Q92784 378 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 TRIM47Q96LD4 638 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 DAGLAQ9Y4D2 1042 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 MKI67P46013 3256 aaKnown RBP12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 CENPFP49454 3210 aa12.66□□□□□ -0.38
SCAMP3-205ENST00000472397 UTYO14607 1347 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 EYA2O00167 538 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 SLC5A1P13866 664 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 OSBPP22059 807 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 ADORA1P30542 326 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 PUM3Q15397 648 aaKnown RBP12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 FAM198AQ9UFP1 575 aa12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
SCAMP3-205ENST00000472397 WDHD1O75717 1129 aaPredicted RBP12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 PHKA1P46020 1223 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 ARHGEF6Q15052 776 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 C17orf99Q6UX52 265 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 RAET1EQ8TD07 263 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 GABRQQ9UN88 632 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 LAMB1P07942 1786 aa12.64□□□□□ -0.39
SCAMP3-205ENST00000472397 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 PPATQ06203 517 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 PICALMQ13492 652 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 HHIPL2Q6UWX4 724 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 GADL1Q6ZQY3 521 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 FAM83AQ86UY5 434 aa12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
SCAMP3-205ENST00000472397 MYPNQ86TC9 1320 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 CCL5P13501 91 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 PRKCZQ05513 592 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 MOGSQ13724 837 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 LPIN2Q92539 896 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 SRRDQ9UH36 339 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 MAST3O60307 1309 aa12.62□□□□□ -0.39
SCAMP3-205ENST00000472397 ELNP15502 786 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 RGS3P49796 1198 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 SH3BP5LQ7L8J4 393 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 ABCF2Q9UG63 623 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 ZHX2Q9Y6X8 837 aa12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 RBBP6Q7Z6E9 1792 aaKnown RBP12.61□□□□□ -0.39
SCAMP3-205ENST00000472397 BRCA2P51587 3418 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 GRK4P32298 578 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 TIMM10P62072 90 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 CEP126Q9P2H0 1117 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 ZNF112Q9UJU3 913 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 LRRFIP2Q9Y608 721 aaKnown RBP12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 ADGRA2Q96PE1 1338 aa12.6□□□□□ -0.39
SCAMP3-205ENST00000472397 DDTLA6NHG4 134 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 TRIM75PA6NK02 468 aa12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 DDX4Q9NQI0 724 aaKnown RBP12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 KCNH4Q9UQ05 1017 aa12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 PTPRCP08575 1304 aa12.59□□□□□ -0.39
SCAMP3-205ENST00000472397 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.4
SCAMP3-205ENST00000472397 SLFN5Q08AF3 891 aa12.58□□□□□ -0.4
SCAMP3-205ENST00000472397 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
SCAMP3-205ENST00000472397 TNNQ9UQP3 1299 aa12.58□□□□□ -0.4
SCAMP3-205ENST00000472397 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
SCAMP3-205ENST00000472397 PEX10O60683 326 aa12.57□□□□□ -0.4
SCAMP3-205ENST00000472397 HOXD10P28358 340 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms