RNA–Protein interactions for RNA: ENST00000472308.1

SHH-205, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-205ENST00000472308 ZBTB7BO15156 539 aaPredicted RBP23.31■■□□□ 1.32
SHH-205ENST00000472308 SLC17A8Q8NDX2 589 aa23.31■■□□□ 1.32
SHH-205ENST00000472308 KAZALD1Q96I82 304 aa23.31■■□□□ 1.32
SHH-205ENST00000472308 RNF208Q9H0X6 261 aa23.31■■□□□ 1.32
SHH-205ENST00000472308 SOX1O00570 391 aaPredicted RBP23.3■■□□□ 1.32
SHH-205ENST00000472308 FMNL1O95466 1100 aaPredicted RBP23.3■■□□□ 1.32
SHH-205ENST00000472308 MIGA2Q7L4E1 593 aa23.3■■□□□ 1.32
SHH-205ENST00000472308 TBC1D22AQ8WUA7 517 aa23.3■■□□□ 1.32
SHH-205ENST00000472308 KCNH4Q9UQ05 1017 aa23.3■■□□□ 1.32
SHH-205ENST00000472308 HOXD10P28358 340 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 PRKCZQ05513 592 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 DCAF15Q66K64 600 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
SHH-205ENST00000472308 HOOK2Q96ED9 719 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 ZNF341Q9BYN7 854 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 TMOD2Q9NZR1 351 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 CUL9Q8IWT3 2517 aa23.29■■□□□ 1.32
SHH-205ENST00000472308 FARP2O94887 1054 aaPredicted RBP23.28■■□□□ 1.32
SHH-205ENST00000472308 MRIQ9BWK5 157 aa23.28■■□□□ 1.32
SHH-205ENST00000472308 NR2E3Q9Y5X4 410 aa23.28■■□□□ 1.32
SHH-205ENST00000472308 BCRP11274 1271 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 SUCLG2Q96I99 432 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 UNC93B1Q9H1C4 597 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 ZNF112Q9UJU3 913 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 MROH5Q6ZUA9 1318 aa23.27■■□□□ 1.32
SHH-205ENST00000472308 VGLL2Q8N8G2 317 aa23.26■■□□□ 1.31
SHH-205ENST00000472308 BIN2Q9UBW5 565 aaPredicted RBP23.26■■□□□ 1.31
SHH-205ENST00000472308 GABRQQ9UN88 632 aa23.26■■□□□ 1.31
SHH-205ENST00000472308 A0A1W2PPC1 479 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 UBXN2AP68543 259 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 LRRC24Q50LG9 513 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 GPAT2Q6NUI2 795 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 SLAIN1Q8ND83 568 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 LRCH3Q96II8 777 aa23.25■■□□□ 1.31
SHH-205ENST00000472308 C9orf78Q9NZ63 289 aaPredicted RBP23.25■■□□□ 1.31
SHH-205ENST00000472308 CYP2C8P10632 490 aa23.24■■□□□ 1.31
SHH-205ENST00000472308 BCAMP50895 628 aa23.24■■□□□ 1.31
SHH-205ENST00000472308 EXOSC9Q06265 439 aaKnown RBP23.24■■□□□ 1.31
SHH-205ENST00000472308 HHIPL2Q6UWX4 724 aa23.24■■□□□ 1.31
SHH-205ENST00000472308 FRAT2O75474 233 aaPredicted RBP23.23■■□□□ 1.31
SHH-205ENST00000472308 ALDH1L1O75891 902 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 SGPL1O95470 568 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 FCGRTP55899 365 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 CAVIN4Q5BKX8 364 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 NOL9Q5SY16 702 aaKnown RBP23.23■■□□□ 1.31
SHH-205ENST00000472308 FAM151AQ8WW52 585 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 PARK7Q99497 189 aaKnown RBP23.23■■□□□ 1.31
SHH-205ENST00000472308 SUGT1Q9Y2Z0 365 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 MAST3O60307 1309 aa23.23■■□□□ 1.31
SHH-205ENST00000472308 MGAMO43451 1857 aa23.22■■□□□ 1.31
SHH-205ENST00000472308 NBPF7P0C2Y1 421 aaPredicted RBP23.22■■□□□ 1.31
SHH-205ENST00000472308 PDE8BO95263 885 aa23.21■■□□□ 1.31
SHH-205ENST00000472308 NFIAQ12857 509 aa23.21■■□□□ 1.31
SHH-205ENST00000472308 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
SHH-205ENST00000472308 UNC80Q8N2C7 3258 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 EVI5O60447 810 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 ELNP15502 786 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 TCP10Q12799 353 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 RABL6Q3YEC7 729 aaPredicted RBP23.2■■□□□ 1.3
SHH-205ENST00000472308 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
SHH-205ENST00000472308 SRCIN1Q9C0H9 1055 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 BICC1Q9H694 974 aaKnown RBP23.2■■□□□ 1.3
SHH-205ENST00000472308 STAP2Q9UGK3 403 aa23.2■■□□□ 1.3
SHH-205ENST00000472308 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 UTYO14607 1347 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 ADCY3O60266 1144 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 INHAP05111 366 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 FLT3LGP49771 235 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 SLC4A10Q6U841 1118 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 ANKRD44Q8N8A2 993 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 DAGLAQ9Y4D2 1042 aa23.19■■□□□ 1.3
SHH-205ENST00000472308 ALPK3Q96L96 1907 aa23.18■■□□□ 1.3
SHH-205ENST00000472308 KIF16BQ96L93 1317 aa23.18■■□□□ 1.3
SHH-205ENST00000472308 CXCL11O14625 94 aa23.18■■□□□ 1.3
SHH-205ENST00000472308 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
SHH-205ENST00000472308 FAM198AQ9UFP1 575 aa23.18■■□□□ 1.3
SHH-205ENST00000472308 FGFR2P21802 821 aa23.17■■□□□ 1.3
SHH-205ENST00000472308 DIXDC1Q155Q3 683 aa23.17■■□□□ 1.3
SHH-205ENST00000472308 KLHDC4Q8TBB5 520 aa23.17■■□□□ 1.3
SHH-205ENST00000472308 DEFB118Q96PH6 123 aa23.17■■□□□ 1.3
SHH-205ENST00000472308 SPINK5Q9NQ38 1064 aaPredicted RBP23.17■■□□□ 1.3
SHH-205ENST00000472308 PAK6Q9NQU5 681 aaPredicted RBP23.17■■□□□ 1.3
SHH-205ENST00000472308 A0A0G2JLL6 359 aaPredicted RBP23.16■■□□□ 1.3
SHH-205ENST00000472308 PRRT2Q7Z6L0 340 aaPredicted RBP23.16■■□□□ 1.3
SHH-205ENST00000472308 ZFPM1Q8IX07 1006 aa23.16■■□□□ 1.3
SHH-205ENST00000472308 PXYLP1Q8TE99 480 aa23.16■■□□□ 1.3
SHH-205ENST00000472308 CRISPLD2Q9H0B8 497 aa23.16■■□□□ 1.3
SHH-205ENST00000472308 PHF20L1A8MW92 1017 aa23.15■■□□□ 1.3
SHH-205ENST00000472308 TFRCP02786 760 aaKnown RBP23.15■■□□□ 1.3
SHH-205ENST00000472308 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
SHH-205ENST00000472308 IRF5Q13568 498 aa23.14■■□□□ 1.29
SHH-205ENST00000472308 PUM3Q15397 648 aaKnown RBP23.14■■□□□ 1.29
SHH-205ENST00000472308 DIS3LQ8TF46 1054 aaKnown RBP23.14■■□□□ 1.29
SHH-205ENST00000472308 PAWRQ96IZ0 340 aaKnown RBP23.14■■□□□ 1.29
SHH-205ENST00000472308 GDF15Q99988 308 aa23.14■■□□□ 1.29
SHH-205ENST00000472308 MNX1P50219 401 aaPredicted RBP23.13■■□□□ 1.29
SHH-205ENST00000472308 WDR66Q8TBY9 1149 aa23.13■■□□□ 1.29
SHH-205ENST00000472308 ZHX2Q9Y6X8 837 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms