RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.57
SMC4-213ENST00000472282 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 MYOZ2Q9NPC6 264 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 TSKSQ9UJT2 592 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 HPS5Q9UPZ3 1129 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 LEMD3Q9Y2U8 911 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 CHMP3Q9Y3E7 222 aa11.46□□□□□ -0.57
SMC4-213ENST00000472282 MYH13Q9UKX3 1938 aa11.46□□□□□ -0.58
SMC4-213ENST00000472282 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.58
SMC4-213ENST00000472282 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
SMC4-213ENST00000472282 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
SMC4-213ENST00000472282 NBPF9Q3BBW0 867 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
SMC4-213ENST00000472282 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
SMC4-213ENST00000472282 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 CDCA5Q96FF9 252 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 SUCLG2Q96I99 432 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 COA1Q9GZY4 146 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
SMC4-213ENST00000472282 UTYO14607 1347 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 GRXCR2A6NFK2 248 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 FAM155AB1AL88 458 aaPredicted RBP11.44□□□□□ -0.58
SMC4-213ENST00000472282 RLBP1P12271 317 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 HUNKP57058 714 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
SMC4-213ENST00000472282 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 HHIPL1Q96JK4 782 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
SMC4-213ENST00000472282 GBA2Q9HCG7 927 aaPredicted RBP11.44□□□□□ -0.58
SMC4-213ENST00000472282 SASH1O94885 1247 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 MAP2K2P36507 400 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 PRSS12P56730 875 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 GTF2IP78347 998 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 PRAMEF18Q5VWM3 479 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 CERS5Q8N5B7 392 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
SMC4-213ENST00000472282 MEIS3Q99687 375 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
SMC4-213ENST00000472282 CD209Q9NNX6 404 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 PCDHAC2Q9Y5I4 1007 aa11.43□□□□□ -0.58
SMC4-213ENST00000472282 WNT10BO00744 389 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 LCE2BO14633 110 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 KCNJ4P48050 445 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 PPP4CP60510 307 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 TTLL5Q6EMB2 1281 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 RGMBQ6NW40 437 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 MOB2Q70IA6 237 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 ITPRIPQ8IWB1 547 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 JAG2Q9Y219 1238 aa11.42□□□□□ -0.58
SMC4-213ENST00000472282 MYO3BQ8WXR4 1341 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
SMC4-213ENST00000472282 MS4A1P11836 297 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
SMC4-213ENST00000472282 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 C20orf194Q5TEA3 1177 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 LDHAL6AQ6ZMR3 332 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 C15orf52Q6ZUT6 534 aaKnown RBP11.41□□□□□ -0.58
SMC4-213ENST00000472282 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 C2orf69Q8N8R5 385 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
SMC4-213ENST00000472282 OTOFQ9HC10 1997 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 LAMB1P07942 1786 aa11.41□□□□□ -0.58
SMC4-213ENST00000472282 AOX1Q06278 1338 aa11.4□□□□□ -0.58
SMC4-213ENST00000472282 PITPNM2Q9BZ72 1349 aa11.4□□□□□ -0.58
SMC4-213ENST00000472282 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
SMC4-213ENST00000472282 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.58
SMC4-213ENST00000472282 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
SMC4-213ENST00000472282 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
SMC4-213ENST00000472282 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
SMC4-213ENST00000472282 GNAI3P08754 354 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 SLC10A3P09131 477 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 IL1R1P14778 569 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 GYG1P46976 350 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 ZNF157P51786 506 aaPredicted RBP11.39□□□□□ -0.59
SMC4-213ENST00000472282 KIF23Q02241 960 aaPredicted RBP11.39□□□□□ -0.59
SMC4-213ENST00000472282 NOGQ13253 232 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 PDE3AQ14432 1141 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 MVPQ14764 893 aaKnown RBP11.39□□□□□ -0.59
SMC4-213ENST00000472282 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 KLHDC4Q8TBB5 520 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 BEGAINQ9BUH8 593 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
SMC4-213ENST00000472282 SSC5DA1L4H1 1573 aa11.38□□□□□ -0.59
SMC4-213ENST00000472282 ZNF804AQ7Z570 1209 aa11.38□□□□□ -0.59
SMC4-213ENST00000472282 RASAL3Q86YV0 1011 aa11.38□□□□□ -0.59
SMC4-213ENST00000472282 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
SMC4-213ENST00000472282 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
SMC4-213ENST00000472282 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
SMC4-213ENST00000472282 TDRD7Q8NHU6 1098 aaKnown RBP11.37□□□□□ -0.59
SMC4-213ENST00000472282 FAM84BQ96KN1 310 aaPredicted RBP11.37□□□□□ -0.59
SMC4-213ENST00000472282 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
SMC4-213ENST00000472282 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
SMC4-213ENST00000472282 RBM27Q9P2N5 1060 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms