RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RAD50Q92878 1312 aa20.24■□□□□ 0.83
CCM2-205ENST00000472223 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 EPHX2P34913 555 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 PPP4CP60510 307 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 USP50Q70EL3 339 aaPredicted RBP20.23■□□□□ 0.83
CCM2-205ENST00000472223 SAMD7Q7Z3H4 446 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 ZNF526Q8TF50 670 aaPredicted RBP20.23■□□□□ 0.83
CCM2-205ENST00000472223 FAM227BQ96M60 508 aa20.23■□□□□ 0.83
CCM2-205ENST00000472223 MBD4O95243 580 aa20.22■□□□□ 0.83
CCM2-205ENST00000472223 ZNF384Q8TF68 577 aa20.22■□□□□ 0.83
CCM2-205ENST00000472223 OSBP2Q969R2 916 aa20.22■□□□□ 0.83
CCM2-205ENST00000472223 PRMT6Q96LA8 375 aaPredicted RBP20.22■□□□□ 0.83
CCM2-205ENST00000472223 PUS7LQ9H0K6 701 aaKnown RBP20.22■□□□□ 0.83
CCM2-205ENST00000472223 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
CCM2-205ENST00000472223 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
CCM2-205ENST00000472223 GPAA1O43292 621 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 APPP05067 770 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 USP5P45974 858 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 TNNI2P48788 182 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 APOBEC3HQ6NTF7 200 aaKnown RBP20.21■□□□□ 0.83
CCM2-205ENST00000472223 ADGRA1Q86SQ6 560 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 NACAP1Q9BZK3 213 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
CCM2-205ENST00000472223 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 SHTN1A0MZ66 631 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 WNT10BO00744 389 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 DYNLL1P63167 89 aaKnown RBP20.2■□□□□ 0.82
CCM2-205ENST00000472223 SLFNL1Q499Z3 407 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
CCM2-205ENST00000472223 AMOTL1Q8IY63 956 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 SEC62Q99442 399 aaKnown RBP20.2■□□□□ 0.82
CCM2-205ENST00000472223 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
CCM2-205ENST00000472223 SLC4A4Q9Y6R1 1079 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
CCM2-205ENST00000472223 M0R2C6 588 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 CHGBP05060 677 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 TNFAIP1Q13829 316 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 CDC42EP5Q6NZY7 148 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 SH3RF3Q8TEJ3 882 aaPredicted RBP20.19■□□□□ 0.82
CCM2-205ENST00000472223 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
CCM2-205ENST00000472223 RIOK1Q9BRS2 568 aaKnown RBP20.19■□□□□ 0.82
CCM2-205ENST00000472223 ESYT1Q9BSJ8 1104 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
CCM2-205ENST00000472223 VEZTQ9HBM0 779 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 GPBP1L1Q9HC44 474 aaPredicted RBP20.19■□□□□ 0.82
CCM2-205ENST00000472223 CLEC11AQ9Y240 323 aa20.19■□□□□ 0.82
CCM2-205ENST00000472223 REC8O95072 547 aa20.18■□□□□ 0.82
CCM2-205ENST00000472223 NBPF9Q3BBW0 867 aa20.18■□□□□ 0.82
CCM2-205ENST00000472223 LCORLQ8N3X6 602 aa20.18■□□□□ 0.82
CCM2-205ENST00000472223 ZC3H15Q8WU90 426 aaKnown RBP20.18■□□□□ 0.82
CCM2-205ENST00000472223 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
CCM2-205ENST00000472223 ZNF70Q9UC06 446 aaPredicted RBP20.18■□□□□ 0.82
CCM2-205ENST00000472223 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
CCM2-205ENST00000472223 CLRN2A0PK11 232 aa20.17■□□□□ 0.82
CCM2-205ENST00000472223 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
CCM2-205ENST00000472223 SGSM2O43147 1006 aa20.17■□□□□ 0.82
CCM2-205ENST00000472223 YY1P25490 414 aa20.17■□□□□ 0.82
CCM2-205ENST00000472223 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
CCM2-205ENST00000472223 APOBEC3FQ8IUX4 373 aaKnown RBP20.17■□□□□ 0.82
CCM2-205ENST00000472223 ATP8A2Q9NTI2 1148 aa20.17■□□□□ 0.82
CCM2-205ENST00000472223 PICALMQ13492 652 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 CCDC129Q6ZRS4 1044 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 TRPM4Q8TD43 1214 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 TGFBRAP1Q8WUH2 860 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 ZBED3Q96IU2 234 aaPredicted RBP20.16■□□□□ 0.82
CCM2-205ENST00000472223 ANO2Q9NQ90 1003 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 PCDHAC2Q9Y5I4 1007 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
CCM2-205ENST00000472223 TDO2P48775 406 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 RHBDL3P58872 404 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
CCM2-205ENST00000472223 FKBP1CQ5VVH2 108 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 IDI2Q9BXS1 227 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 CTNNA3Q9UI47 895 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 ADAMTSL1Q8N6G6 1762 aa20.15■□□□□ 0.82
CCM2-205ENST00000472223 PITPNM2Q9BZ72 1349 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 TCP10L2B9ZVM9 353 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 ENTPD3O75355 529 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 EGFRP00533 1210 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 SULF1Q8IWU6 871 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
CCM2-205ENST00000472223 NAPBQ9H115 298 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 NMRK2Q9NPI5 230 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 GGA3Q9NZ52 723 aa20.14■□□□□ 0.81
CCM2-205ENST00000472223 POTECB2RU33 542 aa20.13■□□□□ 0.81
CCM2-205ENST00000472223 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
CCM2-205ENST00000472223 HSPD1P10809 573 aaKnown RBP20.13■□□□□ 0.81
CCM2-205ENST00000472223 ZNF589Q86UQ0 364 aaPredicted RBP20.13■□□□□ 0.81
CCM2-205ENST00000472223 FAM83AQ86UY5 434 aa20.13■□□□□ 0.81
CCM2-205ENST00000472223 MAPKAPK5Q8IW41 473 aa20.13■□□□□ 0.81
CCM2-205ENST00000472223 SDR42E1Q8WUS8 393 aa20.13■□□□□ 0.81
CCM2-205ENST00000472223 DSCC1Q9BVC3 393 aa20.13■□□□□ 0.81
CCM2-205ENST00000472223 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
CCM2-205ENST00000472223 POLR3DP05423 398 aaPredicted RBP20.12■□□□□ 0.81
CCM2-205ENST00000472223 HIRAP54198 1017 aaPredicted RBP20.12■□□□□ 0.81
CCM2-205ENST00000472223 CACNB3P54284 484 aa20.12■□□□□ 0.81
CCM2-205ENST00000472223 TCP10Q12799 353 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms