RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 MAP3K11Q16584 847 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 LDLRAD1Q5T700 205 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 RASAL3Q86YV0 1011 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 CDAN1Q8IWY9 1227 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
SYN3-211ENST00000472027 AIDAQ96BJ3 306 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 LRP2BPQ9P2M1 347 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 PAPPA2Q9BXP8 1791 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 GAKO14976 1311 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 CYP2E1P05181 493 aaPredicted RBP11.21□□□□□ -0.61
SYN3-211ENST00000472027 ZAP70P43403 619 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.61
SYN3-211ENST00000472027 ZNF384Q8TF68 577 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 NSUN4Q96CB9 384 aaKnown RBP11.21□□□□□ -0.61
SYN3-211ENST00000472027 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 BCL11AQ9H165 835 aa11.21□□□□□ -0.61
SYN3-211ENST00000472027 MROH7-TTC4A0A0A0MT08 1334 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 MYH13Q9UKX3 1938 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 GPR75-ASB3A0A0A6YYF3 556 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 LDHCP07864 332 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
SYN3-211ENST00000472027 BTDP43251 543 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 IREB2P48200 963 aaKnown RBP11.2□□□□□ -0.62
SYN3-211ENST00000472027 GSTO1P78417 241 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 TCP10Q12799 353 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 NFIAQ12857 509 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 FAM151AQ8WW52 585 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 SLC10A4Q96EP9 437 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 CRBNQ96SW2 442 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
SYN3-211ENST00000472027 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 ECM29Q5VYK3 1845 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 SSC5DA1L4H1 1573 aa11.2□□□□□ -0.62
SYN3-211ENST00000472027 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
SYN3-211ENST00000472027 CTCFP49711 727 aaPredicted RBP11.19□□□□□ -0.62
SYN3-211ENST00000472027 IDI2Q9BXS1 227 aa11.19□□□□□ -0.62
SYN3-211ENST00000472027 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
SYN3-211ENST00000472027 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
SYN3-211ENST00000472027 SMARCA5O60264 1052 aaPredicted RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 LBX1P52954 281 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 NAA16Q6N069 864 aaPredicted RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 ZFPM1Q8IX07 1006 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 ANKRD13AQ8IZ07 590 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 CLMNQ96JQ2 1002 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 PIH1D3Q9NQM4 214 aaKnown RBP11.18□□□□□ -0.62
SYN3-211ENST00000472027 NDUFB9Q9Y6M9 179 aa11.18□□□□□ -0.62
SYN3-211ENST00000472027 THSD7BQ9C0I4 1608 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 IGSF3O75054 1194 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 ENTPD3O75355 529 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
SYN3-211ENST00000472027 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
SYN3-211ENST00000472027 RGS3P49796 1198 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 RHBDL3P58872 404 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
SYN3-211ENST00000472027 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYN3-211ENST00000472027 CA12O43570 354 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 IDH1O75874 414 aaKnown RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 BAG3O95817 575 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 MAP4K4O95819 1239 aaPredicted RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 TM4SF4P48230 202 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 PICALMQ13492 652 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 DCAF15Q66K64 600 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYN3-211ENST00000472027 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 NOL10Q9BSC4 688 aaKnown RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 ELP3Q9H9T3 547 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 DDX4Q9NQI0 724 aaKnown RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 PRDM10Q9NQV6 1147 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 TSKSQ9UJT2 592 aa11.16□□□□□ -0.62
SYN3-211ENST00000472027 SUPT16HQ9Y5B9 1047 aaKnown RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
SYN3-211ENST00000472027 TRPA1O75762 1119 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 ZBTB48P10074 688 aaPredicted RBP11.15□□□□□ -0.62
SYN3-211ENST00000472027 ATP5JP18859 108 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 CYP7A1P22680 504 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 PPP4CP60510 307 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 MAP3K12Q12852 859 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 VGLL4Q14135 290 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 TTF1Q15361 905 aaPredicted RBP11.15□□□□□ -0.62
SYN3-211ENST00000472027 SH3BP5LQ7L8J4 393 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
SYN3-211ENST00000472027 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
SYN3-211ENST00000472027 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
SYN3-211ENST00000472027 WRNIP1Q96S55 665 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms