RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 SMG8Q8ND04 991 aaKnown RBP4.48□□□□□ -1.69
SCN3A-207ENST00000471697 OR13H1Q8NG92 308 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 DHX38Q92620 1227 aaKnown RBP4.48□□□□□ -1.69
SCN3A-207ENST00000471697 GATA6Q92908 595 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 HINFPQ9BQA5 517 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 TINF2Q9BSI4 451 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 NLRP2Q9NX02 1062 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 BIN2Q9UBW5 565 aaPredicted RBP4.48□□□□□ -1.69
SCN3A-207ENST00000471697 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
SCN3A-207ENST00000471697 NOP58Q9Y2X3 529 aaKnown RBP4.48□□□□□ -1.69
SCN3A-207ENST00000471697 RBM19Q9Y4C8 960 aaKnown RBP4.48□□□□□ -1.69
SCN3A-207ENST00000471697 CCDC194A0A1B0GVG4 234 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 H3BRJ5 948 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 TSPAN15O95858 294 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 RXRBP28702 533 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 FGD1P98174 961 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 HYAL2Q12891 473 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 LDLRAD1Q5T700 205 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 NLGN1Q8N2Q7 840 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 EZH1Q92800 747 aaPredicted RBP4.47□□□□□ -1.69
SCN3A-207ENST00000471697 CLP1Q92989 425 aaKnown RBP4.47□□□□□ -1.69
SCN3A-207ENST00000471697 GMLQ99445 158 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 PLCD4Q9BRC7 762 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 PIF1Q9H611 641 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
SCN3A-207ENST00000471697 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
SCN3A-207ENST00000471697 A0A0U1RQG5 324 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 HMGB1P1B2RPK0 211 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 PEX14O75381 377 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 KIF4AO95239 1232 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 PTPRAP18433 802 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 RAP1GAPP47736 663 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 FAM69CQ0P6D2 419 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 TCEAL1Q15170 157 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 RALBP1Q15311 655 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 NFKBIBQ15653 356 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 HSP90AB2PQ58FF8 381 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 COL13A1Q5TAT6 717 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 C9orf131Q5VYM1 1079 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 APBB1IPQ7Z5R6 666 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 METTL16Q86W50 562 aaKnown RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 LRRC56Q8IYG6 542 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 RGL4Q8IZJ4 473 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 CMTR1Q8N1G2 835 aaKnown RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 ZCRB1Q8TBF4 217 aaKnown RBP4.46□□□□□ -1.7
SCN3A-207ENST00000471697 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 ASB16Q96NS5 453 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 TMPRSS13Q9BYE2 586 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 TERF2IPQ9NYB0 399 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 LMCD1Q9NZU5 365 aa4.46□□□□□ -1.7
SCN3A-207ENST00000471697 FAM170BA6NMN3 283 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 FUT4P22083 530 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 CDC25BP30305 580 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 GTF2F1P35269 517 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCN3A-207ENST00000471697 CYP27A1Q02318 531 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 SOGA3Q5TF21 947 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 DUSP27Q5VZP5 1158 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 ZNF746Q6NUN9 644 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-207ENST00000471697 SPRED2Q7Z698 418 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 PMM1Q92871 262 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 MISP3Q96FF7 219 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 PBX4Q9BYU1 374 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 RASSF4Q9H2L5 321 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 SH2B1Q9NRF2 756 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-207ENST00000471697 EGFL7Q9UHF1 273 aa4.45□□□□□ -1.7
SCN3A-207ENST00000471697 ZSCAN22P10073 491 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 HSD3B2P26439 372 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 NUTM2GQ5VZR2 741 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 ZNF574Q6ZN55 896 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 AMIGO3Q86WK7 504 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 NME8Q8N427 588 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 C12orf50Q8NA57 414 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 FAM200AQ8TCP9 573 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 SGSM3Q96HU1 749 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 PRIMPOLQ96LW4 560 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 PPP1R16BQ96T49 567 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 TGIF2Q9GZN2 237 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 RC3H2Q9HBD1 1191 aaKnown RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 CYP4F12Q9HCS2 524 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 MBNL3Q9NUK0 354 aaKnown RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 FAM53CQ9NYF3 392 aa4.44□□□□□ -1.7
SCN3A-207ENST00000471697 LAS1LQ9Y4W2 734 aaKnown RBP4.44□□□□□ -1.7
SCN3A-207ENST00000471697 FAM177BA6PVY3 158 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 RNASE1P07998 156 aaKnown RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 ATP2B4P23634 1241 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 WEE1P30291 646 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 CABP4P57796 275 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 NLRP12P59046 1061 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 TRIP4Q15650 581 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 EAPPQ56P03 285 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 RNF187Q5TA31 235 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 CDPF1Q6NVV7 123 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 NT5DC4Q86YG4 428 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 ZSCAN29Q8IWY8 852 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-207ENST00000471697 CEP120Q8N960 986 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 FBLIM1Q8WUP2 373 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 EVI5LQ96CN4 794 aa4.43□□□□□ -1.7
SCN3A-207ENST00000471697 CCDC136Q96JN2 1154 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms