RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
SF3A1-207ENST00000471342 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
SF3A1-207ENST00000471342 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
SF3A1-207ENST00000471342 PALD1Q9ULE6 856 aa11.94□□□□□ -0.5
SF3A1-207ENST00000471342 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 CCDC171Q6TFL3 1326 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 MYO3BQ8WXR4 1341 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 GLTPD2A6NH11 291 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 WNT10BO00744 389 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 FRAT2O75474 233 aaPredicted RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 MBD4O95243 580 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 BTDP43251 543 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 TNIP1Q15025 636 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 ALX1Q15699 326 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 NBPF9Q3BBW0 867 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 RASEFQ8IZ41 740 aa11.93□□□□□ -0.5
SF3A1-207ENST00000471342 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
SF3A1-207ENST00000471342 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 RAD50Q92878 1312 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 TIAM2Q8IVF5 1701 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 AATFQ9NY61 560 aaKnown RBP eCLIP11.92□□□□□ -0.5
SF3A1-207ENST00000471342 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
SF3A1-207ENST00000471342 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 FGAP02671 866 aa11.91□□□□□ -0.5
SF3A1-207ENST00000471342 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 STOX1Q6ZVD7 989 aa11.91□□□□□ -0.5
SF3A1-207ENST00000471342 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
SF3A1-207ENST00000471342 DSCC1Q9BVC3 393 aa11.91□□□□□ -0.5
SF3A1-207ENST00000471342 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 MYOZ2Q9NPC6 264 aa11.91□□□□□ -0.5
SF3A1-207ENST00000471342 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
SF3A1-207ENST00000471342 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 HIP1O00291 1037 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
SF3A1-207ENST00000471342 FGRP09769 529 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 CYP2D6P10635 497 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 HSPA4P34932 840 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 CACNB3P54284 484 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 SPDYE2Q495Y8 402 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 ZSCAN25Q6NSZ9 544 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 DLK2Q6UY11 383 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 METTL16Q86W50 562 aaKnown RBP11.9□□□□□ -0.5
SF3A1-207ENST00000471342 DZIP1Q86YF9 867 aaKnown RBP11.9□□□□□ -0.5
SF3A1-207ENST00000471342 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 WDR90Q96KV7 1748 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 TEPSINQ96N21 525 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 INCENPQ9NQS7 918 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 DIAPH3Q9NSV4 1193 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 GJA3Q9Y6H8 435 aa11.9□□□□□ -0.5
SF3A1-207ENST00000471342 G3V3G9 751 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 EPB41L2O43491 1005 aaKnown RBP11.89□□□□□ -0.51
SF3A1-207ENST00000471342 CYP21A2P08686 494 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
SF3A1-207ENST00000471342 GABPAQ06546 454 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 RRP1BQ14684 758 aaKnown RBP11.89□□□□□ -0.51
SF3A1-207ENST00000471342 TSGA10IPQ3SY00 556 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 CTR9Q6PD62 1173 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-207ENST00000471342 SCAF8Q9UPN6 1271 aaKnown RBP11.89□□□□□ -0.51
SF3A1-207ENST00000471342 MYH7P12883 1935 aa11.89□□□□□ -0.51
SF3A1-207ENST00000471342 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 FLT1P17948 1338 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 DDTLA6NHG4 134 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-207ENST00000471342 MMP14P50281 582 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 PLCD1P51178 756 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 GSTO1P78417 241 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 JAG1P78504 1218 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 MAP3K10Q02779 954 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 TBC1D10BQ4KMP7 808 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-207ENST00000471342 SBK1Q52WX2 424 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 TBC1D10CQ8IV04 446 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 TBC1D32Q96NH3 1257 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 TAF1DQ9H5J8 278 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-207ENST00000471342 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.88□□□□□ -0.51
SF3A1-207ENST00000471342 RBM8AQ9Y5S9 174 aaKnown RBP11.88□□□□□ -0.51
SF3A1-207ENST00000471342 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
SF3A1-207ENST00000471342 SLC27A2O14975 620 aa11.87□□□□□ -0.51
SF3A1-207ENST00000471342 LDHCP07864 332 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms