RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 L1RE1Q9UN81 338 aa4.84□□□□□ -1.64
VPS50-210ENST00000471188 MYOM1P52179 1685 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 RPGRIP1LQ68CZ1 1315 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 TTC21AQ8NDW8 1320 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 VWA3AA6NCI4 1184 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 ERCC3P19447 782 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 VSNL1P62760 191 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 E2F5Q15329 346 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 DPCR1Q3MIW9 517 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 CEP85LQ5SZL2 805 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 SRGAP1Q7Z6B7 1085 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 FAM76AQ8TAV0 307 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 FTOQ9C0B1 505 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS50-210ENST00000471188 SIL1Q9H173 461 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 YEATS2Q9ULM3 1422 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 TPCN1Q9ULQ1 816 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 PIK3R4Q99570 1358 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 NEURL4Q96JN8 1562 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 SSH2Q76I76 1423 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 NDUFAB1O14561 156 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 PPFIA3O75145 1194 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 EZRP15311 586 aaKnown RBP4.83□□□□□ -1.64
VPS50-210ENST00000471188 FANCCQ00597 558 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 ZKSCAN8Q15776 578 aaPredicted RBP4.83□□□□□ -1.64
VPS50-210ENST00000471188 IGSF22Q8N9C0 903 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 ZKSCAN4Q969J2 545 aaPredicted RBP4.83□□□□□ -1.64
VPS50-210ENST00000471188 EHD4Q9H223 541 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 WBP1LQ9NX94 342 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 TERF2IPQ9NYB0 399 aa4.83□□□□□ -1.64
VPS50-210ENST00000471188 PTPRTO14522 1441 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 FAM83GA6ND36 823 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 GOLGA6L9A6NEM1 432 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 LRRIQ3A6PVS8 624 aaPredicted RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 C3orf80F5H4A9 247 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 SGSM2O43147 1006 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ARHGAP6O43182 974 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 C21orf2O43822 256 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 GNAI2P04899 355 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ATP1A3P13637 1013 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CCNHP51946 323 aaPredicted RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 RBM5P52756 815 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS50-210ENST00000471188 TMEM132EQ6IEE7 984 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CNTROBQ8N137 903 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ZNF513Q8N8E2 541 aaPredicted RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 ARMC2Q8NEN0 867 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 STAG1Q8WVM7 1258 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 BRF1Q92994 677 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 PHACTR3Q96KR7 559 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 BAG1Q99933 345 aaPredicted RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 TACO1Q9BSH4 297 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 NUCKS1Q9H1E3 243 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 KAT14Q9H8E8 782 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ANKZF1Q9H8Y5 726 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 FAM198AQ9UFP1 575 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 POGZQ7Z3K3 1410 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ATP10DQ9P241 1426 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 TRAPPC8Q9Y2L5 1435 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CEP152O94986 1710 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 A0A1B0GVL5 298 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CTAGE15A4D2H0 777 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 KLHL33A6NCF5 533 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 GOLGA6CA6NDK9 693 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ENO4A6NNW6 628 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CUTAO60888 179 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 AP1G2O75843 785 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 GOLGA6DP0CG33 693 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CTAGE8P0CG41 777 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 FBLN1P23142 703 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 KCNJ6P48051 423 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 NAP1L1P55209 391 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 GNGT1P63211 74 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 PSMD2Q13200 908 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 NFE2L2Q16236 605 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 NBPF9Q3BBW0 867 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ARMC3Q5W041 872 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 PADI6Q6TGC4 694 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 NUDT18Q6ZVK8 323 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CTAGE6Q86UF2 777 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 CTAGE4Q8IX94 777 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 KIF9Q9HAQ2 790 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 GOLGA6AQ9NYA3 693 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS50-210ENST00000471188 KIF5CO60282 957 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ZEB2O60315 1214 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 JAK2O60674 1132 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 FCHSD2O94868 740 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 TFRCP02786 760 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 ADKP55263 362 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 CRYMQ14894 314 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ZNF569Q5MCW4 686 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 RBM26Q5T8P6 1007 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 BLOC1S2Q6QNY1 142 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 NBPF5PQ86XG9 351 aaPredicted RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 HNRNPLLQ8WVV9 542 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 PIK3R5Q8WYR1 880 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 ZBTB10Q96DT7 871 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 THOC1Q96FV9 657 aaKnown RBP4.82□□□□□ -1.64
VPS50-210ENST00000471188 GOLPH3LQ9H4A5 285 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 MCM8Q9UJA3 840 aa4.82□□□□□ -1.64
VPS50-210ENST00000471188 MLH3Q9UHC1 1453 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms