RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 G3BP1Q13283 466 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCG5-204ENST00000471027 CRHR2Q13324 411 aa11.04□□□□□ -0.64
SCG5-204ENST00000471027 PPIL2Q13356 520 aa11.04□□□□□ -0.64
SCG5-204ENST00000471027 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
SCG5-204ENST00000471027 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
SCG5-204ENST00000471027 FAM163AQ96GL9 167 aaPredicted RBP11.04□□□□□ -0.64
SCG5-204ENST00000471027 PCDHAC2Q9Y5I4 1007 aa11.04□□□□□ -0.64
SCG5-204ENST00000471027 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 POLR2AP24928 1970 aaKnown RBP11.03□□□□□ -0.64
SCG5-204ENST00000471027 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCG5-204ENST00000471027 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 MS4A1P11836 297 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 HOXD10P28358 340 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 NOL10Q9BSC4 688 aaKnown RBP11.03□□□□□ -0.64
SCG5-204ENST00000471027 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 USP40Q9NVE5 1235 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
SCG5-204ENST00000471027 TLR2O60603 784 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 SOX10P56693 466 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 ERICH6Q7L0X2 663 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 FASTKD5Q7L8L6 764 aaKnown RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 CERS3Q8IU89 383 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 FTSJ3Q8IY81 847 aaKnown RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
SCG5-204ENST00000471027 MEIS3Q99687 375 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 IDI2Q9BXS1 227 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 ABCF2Q9UG63 623 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 FZD1Q9UP38 647 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 DAGLAQ9Y4D2 1042 aa11.02□□□□□ -0.65
SCG5-204ENST00000471027 A0A1B0GUL7 405 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 CXCL11O14625 94 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 PLCG2P16885 1265 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 CAPN2P17655 700 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
SCG5-204ENST00000471027 CDC42EP5Q6NZY7 148 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 BRI3BPQ8WY22 251 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 GCC1Q96CN9 775 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 CHMP4BQ9H444 224 aaKnown RBP11.01□□□□□ -0.65
SCG5-204ENST00000471027 ZNF112Q9UJU3 913 aa11.01□□□□□ -0.65
SCG5-204ENST00000471027 BAG3O95817 575 aa11□□□□□ -0.65
SCG5-204ENST00000471027 TRIM27P14373 513 aa11□□□□□ -0.65
SCG5-204ENST00000471027 PRDX5P30044 214 aa11□□□□□ -0.65
SCG5-204ENST00000471027 PHKA1P46020 1223 aa11□□□□□ -0.65
SCG5-204ENST00000471027 CACNB3P54284 484 aa11□□□□□ -0.65
SCG5-204ENST00000471027 TIMM10P62072 90 aa11□□□□□ -0.65
SCG5-204ENST00000471027 TCP10Q12799 353 aa11□□□□□ -0.65
SCG5-204ENST00000471027 GRIK5Q16478 980 aa11□□□□□ -0.65
SCG5-204ENST00000471027 SLC9C1Q4G0N8 1177 aa11□□□□□ -0.65
SCG5-204ENST00000471027 CCDC158Q5M9N0 1113 aa11□□□□□ -0.65
SCG5-204ENST00000471027 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
SCG5-204ENST00000471027 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
SCG5-204ENST00000471027 ZKSCAN4Q969J2 545 aaPredicted RBP11□□□□□ -0.65
SCG5-204ENST00000471027 XAGE2Q96GT9 111 aa11□□□□□ -0.65
SCG5-204ENST00000471027 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
SCG5-204ENST00000471027 PTPN18Q99952 460 aa11□□□□□ -0.65
SCG5-204ENST00000471027 GPR108Q9NPR9 543 aa11□□□□□ -0.65
SCG5-204ENST00000471027 SNCAIPQ9Y6H5 919 aa11□□□□□ -0.65
SCG5-204ENST00000471027 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 IRF6O14896 467 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 CTNND1O60716 968 aaKnown RBP10.99□□□□□ -0.65
SCG5-204ENST00000471027 GJA5P36382 358 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 OS9Q13438 667 aaPredicted RBP10.99□□□□□ -0.65
SCG5-204ENST00000471027 DIXDC1Q155Q3 683 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 MIGA2Q7L4E1 593 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 SPATA5Q8NB90 893 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 CD99L2Q8TCZ2 262 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 ARMC5Q96C12 935 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 KCNH4Q9UQ05 1017 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 GAKO14976 1311 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 AOX1Q06278 1338 aa10.99□□□□□ -0.65
SCG5-204ENST00000471027 ZNF646O15015 1829 aaPredicted RBP10.98□□□□□ -0.65
SCG5-204ENST00000471027 TBC1D12O60347 775 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 TFCP2Q12800 502 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 PABPC4Q13310 644 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCG5-204ENST00000471027 RASGRF1Q13972 1273 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 HSP90AB4PQ58FF6 505 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 SCYL3Q8IZE3 742 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
SCG5-204ENST00000471027 R3HDMLQ9H3Y0 253 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 LRP2BPQ9P2M1 347 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 PA2G4Q9UQ80 394 aaKnown RBP10.98□□□□□ -0.65
SCG5-204ENST00000471027 SLC45A1Q9Y2W3 748 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 MROH7-TTC4A0A0A0MT08 1334 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
SCG5-204ENST00000471027 GPR75-ASB3A0A0A6YYF3 556 aa10.97□□□□□ -0.65
SCG5-204ENST00000471027 BTBD19C9JJ37 291 aa10.97□□□□□ -0.65
SCG5-204ENST00000471027 PDHXO00330 501 aa10.97□□□□□ -0.65
SCG5-204ENST00000471027 RGS3P49796 1198 aa10.97□□□□□ -0.65
SCG5-204ENST00000471027 LACTBP83111 547 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms