RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 HPS5Q9UPZ3 1129 aa38.83■■■■□ 3.81
HMG20B-209ENST00000470356 TFCP2Q12800 502 aa38.82■■■■□ 3.8
HMG20B-209ENST00000470356 DIEXFQ68CQ4 756 aaKnown RBP38.82■■■■□ 3.8
HMG20B-209ENST00000470356 CDC42EP5Q6NZY7 148 aa38.82■■■■□ 3.8
HMG20B-209ENST00000470356 CNKSR2Q8WXI2 1034 aa38.82■■■■□ 3.8
HMG20B-209ENST00000470356 FAM151AQ8WW52 585 aa38.81■■■■□ 3.8
HMG20B-209ENST00000470356 A0A1B0GUL7 405 aa38.8■■■■□ 3.8
HMG20B-209ENST00000470356 ZKSCAN2Q63HK3 967 aa38.8■■■■□ 3.8
HMG20B-209ENST00000470356 ZGPATQ8N5A5 531 aaKnown RBP38.8■■■■□ 3.8
HMG20B-209ENST00000470356 AK9Q5TCS8 1911 aa38.79■■■■□ 3.8
HMG20B-209ENST00000470356 DCAF15Q66K64 600 aa38.79■■■■□ 3.8
HMG20B-209ENST00000470356 WRNIP1Q96S55 665 aa38.79■■■■□ 3.8
HMG20B-209ENST00000470356 PDS5AQ29RF7 1337 aaKnown RBP38.79■■■■□ 3.8
HMG20B-209ENST00000470356 MYH2Q9UKX2 1941 aa38.79■■■■□ 3.8
HMG20B-209ENST00000470356 GTF2A2P52657 109 aa38.78■■■■□ 3.8
HMG20B-209ENST00000470356 CRHR2Q13324 411 aa38.78■■■■□ 3.8
HMG20B-209ENST00000470356 RASGRF1Q13972 1273 aa38.78■■■■□ 3.8
HMG20B-209ENST00000470356 FBXO46Q6PJ61 603 aaPredicted RBP38.78■■■■□ 3.8
HMG20B-209ENST00000470356 XAGE2Q96GT9 111 aa38.78■■■■□ 3.8
HMG20B-209ENST00000470356 SPDYE5A6NIY4 337 aa38.77■■■■□ 3.8
HMG20B-209ENST00000470356 OTUD5Q96G74 571 aa38.77■■■■□ 3.8
HMG20B-209ENST00000470356 SNCAIPQ9Y6H5 919 aa38.77■■■■□ 3.8
HMG20B-209ENST00000470356 MVPQ14764 893 aaKnown RBP38.76■■■■□ 3.8
HMG20B-209ENST00000470356 TMEM57Q8N5G2 664 aa38.76■■■■□ 3.8
HMG20B-209ENST00000470356 BRI3BPQ8WY22 251 aa38.76■■■■□ 3.8
HMG20B-209ENST00000470356 USP40Q9NVE5 1235 aa38.76■■■■□ 3.8
HMG20B-209ENST00000470356 ERO1BQ86YB8 467 aa38.75■■■■□ 3.79
HMG20B-209ENST00000470356 ZKSCAN4Q969J2 545 aaPredicted RBP38.75■■■■□ 3.79
HMG20B-209ENST00000470356 ZNF341Q9BYN7 854 aa38.75■■■■□ 3.79
HMG20B-209ENST00000470356 CCL15-CCL14A0A0B4J2E2 113 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 PNMA6EA0A0J9YXQ4 647 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 SOX10P56693 466 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 TCP10Q12799 353 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 NFIAQ12857 509 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 CCL15Q16663 113 aa38.74■■■■□ 3.79
HMG20B-209ENST00000470356 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP38.74■■■■□ 3.79
HMG20B-209ENST00000470356 MIGA2Q7L4E1 593 aa38.73■■■■□ 3.79
HMG20B-209ENST00000470356 FAM198AQ9UFP1 575 aa38.73■■■■□ 3.79
HMG20B-209ENST00000470356 PDE4DIPQ5VU43 2346 aa38.73■■■■□ 3.79
HMG20B-209ENST00000470356 SPTY2D1Q68D10 685 aaPredicted RBP38.72■■■■□ 3.79
HMG20B-209ENST00000470356 NEUROD6Q96NK8 337 aa38.72■■■■□ 3.79
HMG20B-209ENST00000470356 GAKO14976 1311 aa38.71■■■■□ 3.79
HMG20B-209ENST00000470356 G3BP1Q13283 466 aaKnown RBP eCLIP38.71■■■■□ 3.79
HMG20B-209ENST00000470356 ERO1AQ96HE7 468 aa38.71■■■■□ 3.79
HMG20B-209ENST00000470356 ABCF2Q9UG63 623 aa38.71■■■■□ 3.79
HMG20B-209ENST00000470356 DZIP1Q86YF9 867 aaKnown RBP38.7■■■■□ 3.79
HMG20B-209ENST00000470356 SLF2Q8IX21 1173 aa38.7■■■■□ 3.79
HMG20B-209ENST00000470356 FAM163AQ96GL9 167 aaPredicted RBP38.7■■■■□ 3.79
HMG20B-209ENST00000470356 OTOP1Q7RTM1 612 aa38.69■■■■□ 3.78
HMG20B-209ENST00000470356 ZNF112Q9UJU3 913 aa38.69■■■■□ 3.78
HMG20B-209ENST00000470356 TRIM17Q9Y577 477 aa38.69■■■■□ 3.78
HMG20B-209ENST00000470356 CETPP11597 493 aa38.68■■■■□ 3.78
HMG20B-209ENST00000470356 PPIL2Q13356 520 aa38.68■■■■□ 3.78
HMG20B-209ENST00000470356 IDI2Q9BXS1 227 aa38.68■■■■□ 3.78
HMG20B-209ENST00000470356 IRF6O14896 467 aa38.67■■■■□ 3.78
HMG20B-209ENST00000470356 SP3Q02447 781 aa38.67■■■■□ 3.78
HMG20B-209ENST00000470356 FAM43AQ8N2R8 423 aa38.67■■■■□ 3.78
HMG20B-209ENST00000470356 INPP5BP32019 993 aa38.66■■■■□ 3.78
HMG20B-209ENST00000470356 SNAPC2Q13487 334 aa38.66■■■■□ 3.78
HMG20B-209ENST00000470356 TAF1CQ15572 869 aaPredicted RBP38.66■■■■□ 3.78
HMG20B-209ENST00000470356 GORABQ5T7V8 394 aa38.66■■■■□ 3.78
HMG20B-209ENST00000470356 ZFYVE28Q9HCC9 887 aa38.66■■■■□ 3.78
HMG20B-209ENST00000470356 ENTPD3O75355 529 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 PPATQ06203 517 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 POLA2Q14181 598 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 ZFPM1Q8IX07 1006 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 CD99L2Q8TCZ2 262 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 HMG20BQ9P0W2 317 aa38.65■■■■□ 3.78
HMG20B-209ENST00000470356 ERICH6Q7L0X2 663 aa38.64■■■■□ 3.78
HMG20B-209ENST00000470356 ZCCHC17Q9NP64 241 aaKnown RBP38.64■■■■□ 3.78
HMG20B-209ENST00000470356 TNRC18O15417 2968 aaPredicted RBP38.64■■■■□ 3.78
HMG20B-209ENST00000470356 RGS3P49796 1198 aa38.63■■■■□ 3.77
HMG20B-209ENST00000470356 ATP8B2P98198 1209 aa38.63■■■■□ 3.77
HMG20B-209ENST00000470356 FTSJ3Q8IY81 847 aaKnown RBP38.63■■■■□ 3.77
HMG20B-209ENST00000470356 SPATA5Q8NB90 893 aa38.63■■■■□ 3.77
HMG20B-209ENST00000470356 ARID4AP29374 1257 aaPredicted RBP38.62■■■■□ 3.77
HMG20B-209ENST00000470356 MECOMQ03112 1051 aa38.62■■■■□ 3.77
HMG20B-209ENST00000470356 SSH3Q8TE77 659 aa38.62■■■■□ 3.77
HMG20B-209ENST00000470356 RFX7Q2KHR2 1363 aa38.61■■■■□ 3.77
HMG20B-209ENST00000470356 MROH7-TTC4A0A0A0MT08 1334 aa38.61■■■■□ 3.77
HMG20B-209ENST00000470356 ZBED9Q6R2W3 1325 aa38.61■■■■□ 3.77
HMG20B-209ENST00000470356 WDHD1O75717 1129 aaPredicted RBP38.6■■■■□ 3.77
HMG20B-209ENST00000470356 NOL9Q5SY16 702 aaKnown RBP38.6■■■■□ 3.77
HMG20B-209ENST00000470356 EFCC1Q9HA90 598 aa38.6■■■■□ 3.77
HMG20B-209ENST00000470356 GPR75-ASB3A0A0A6YYF3 556 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 BTBD19C9JJ37 291 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 BTDP43251 543 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 PI16Q6UXB8 463 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 ZNF384Q8TF68 577 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 GPR108Q9NPR9 543 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 PTPN22Q9Y2R2 807 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 DOCK2Q92608 1830 aa38.59■■■■□ 3.77
HMG20B-209ENST00000470356 ATRNL1Q5VV63 1379 aa38.58■■■■□ 3.77
HMG20B-209ENST00000470356 RLBP1P12271 317 aa38.58■■■■□ 3.77
HMG20B-209ENST00000470356 HTTP42858 3142 aa38.58■■■■□ 3.77
HMG20B-209ENST00000470356 ZBTB7BO15156 539 aaPredicted RBP38.57■■■■□ 3.76
HMG20B-209ENST00000470356 UQCRFS1P1P0C7P4 283 aa38.57■■■■□ 3.76
HMG20B-209ENST00000470356 ITPRIPQ8IWB1 547 aa38.57■■■■□ 3.76
HMG20B-209ENST00000470356 KCNH4Q9UQ05 1017 aa38.57■■■■□ 3.76
HMG20B-209ENST00000470356 GSTO1P78417 241 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms