RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 DIXDC1Q155Q3 683 aa17.36■□□□□ 0.37
COMMD3-208ENST00000470045 RNF186Q9NXI6 227 aa17.36■□□□□ 0.37
COMMD3-208ENST00000470045 TNNI3KQ59H18 835 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
COMMD3-208ENST00000470045 NEUROD6Q96NK8 337 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 TMOD2Q9NZR1 351 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 FPGT-TNNI3KV9GXZ4 949 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 GAKO14976 1311 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 DOCK2Q92608 1830 aa17.35■□□□□ 0.37
COMMD3-208ENST00000470045 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
COMMD3-208ENST00000470045 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
COMMD3-208ENST00000470045 TM4SF4P48230 202 aa17.34■□□□□ 0.37
COMMD3-208ENST00000470045 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
COMMD3-208ENST00000470045 CLMNQ96JQ2 1002 aa17.34■□□□□ 0.37
COMMD3-208ENST00000470045 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
COMMD3-208ENST00000470045 ZBTB48P10074 688 aaPredicted RBP17.33■□□□□ 0.36
COMMD3-208ENST00000470045 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
COMMD3-208ENST00000470045 ANKRD13AQ8IZ07 590 aa17.33■□□□□ 0.36
COMMD3-208ENST00000470045 FAM163AQ96GL9 167 aaPredicted RBP17.33■□□□□ 0.36
COMMD3-208ENST00000470045 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
COMMD3-208ENST00000470045 TRPA1O75762 1119 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 MCAMP43121 646 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-208ENST00000470045 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 SPTY2D1Q68D10 685 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-208ENST00000470045 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 SPATA5Q8NB90 893 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.32■□□□□ 0.36
COMMD3-208ENST00000470045 SLC10A4Q96EP9 437 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 ZBTB40Q9NUA8 1239 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 COG6Q9Y2V7 657 aa17.32■□□□□ 0.36
COMMD3-208ENST00000470045 MYO5AQ9Y4I1 1855 aaKnown RBP17.32■□□□□ 0.36
COMMD3-208ENST00000470045 UQCRFS1P1P0C7P4 283 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 MKRN3Q13064 507 aaKnown RBP17.31■□□□□ 0.36
COMMD3-208ENST00000470045 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
COMMD3-208ENST00000470045 DZIP1Q86YF9 867 aaKnown RBP17.31■□□□□ 0.36
COMMD3-208ENST00000470045 ZNF384Q8TF68 577 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 FAM151AQ8WW52 585 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 ZNF512BQ96KM6 892 aaPredicted RBP17.31■□□□□ 0.36
COMMD3-208ENST00000470045 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
COMMD3-208ENST00000470045 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 GJA5P36382 358 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 NFIAQ12857 509 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 SLF2Q8IX21 1173 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 HOOK2Q96ED9 719 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 FAM198AQ9UFP1 575 aa17.3■□□□□ 0.36
COMMD3-208ENST00000470045 MANSC4A6NHS7 340 aaPredicted RBP17.29■□□□□ 0.36
COMMD3-208ENST00000470045 MECOMQ03112 1051 aa17.29■□□□□ 0.36
COMMD3-208ENST00000470045 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
COMMD3-208ENST00000470045 IDI2Q9BXS1 227 aa17.29■□□□□ 0.36
COMMD3-208ENST00000470045 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
COMMD3-208ENST00000470045 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
COMMD3-208ENST00000470045 INHBEP58166 350 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 VGLL4Q14135 290 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 ERC1Q8IUD2 1116 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 SIRT2Q8IXJ6 389 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 RPAP2Q8IXW5 612 aaPredicted RBP17.28■□□□□ 0.36
COMMD3-208ENST00000470045 NSUN4Q96CB9 384 aaKnown RBP17.28■□□□□ 0.36
COMMD3-208ENST00000470045 EAF2Q96CJ1 260 aaPredicted RBP17.28■□□□□ 0.36
COMMD3-208ENST00000470045 EXOC6BQ9Y2D4 811 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 CDK5RAP2Q96SN8 1893 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 ATRNL1Q5VV63 1379 aa17.28■□□□□ 0.36
COMMD3-208ENST00000470045 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 NOM1Q5C9Z4 860 aaKnown RBP17.27■□□□□ 0.36
COMMD3-208ENST00000470045 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 C20orf194Q5TEA3 1177 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 DCAF15Q66K64 600 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 OPTNQ96CV9 577 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.36
COMMD3-208ENST00000470045 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
COMMD3-208ENST00000470045 TLR7Q9NYK1 1049 aaKnown RBP17.27■□□□□ 0.36
COMMD3-208ENST00000470045 TESPA1A2RU30 521 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-208ENST00000470045 ENTPD3O75355 529 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-208ENST00000470045 BTDP43251 543 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 RHBDL3P58872 404 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 TCP10Q12799 353 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 HSP90AB4PQ58FF6 505 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-208ENST00000470045 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
COMMD3-208ENST00000470045 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-208ENST00000470045 SPDYE5A6NIY4 337 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
COMMD3-208ENST00000470045 IGSF3O75054 1194 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 MAP4K4O95819 1239 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-208ENST00000470045 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 RGS3P49796 1198 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 GSTO1P78417 241 aa17.25■□□□□ 0.35
COMMD3-208ENST00000470045 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms