RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
MCF2L-222ENST00000469558 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 MROH7-TTC4A0A0A0MT08 1334 aa14.31□□□□□ -0.12
MCF2L-222ENST00000469558 RPAP1Q9BWH6 1393 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-222ENST00000469558 CDK5RAP2Q96SN8 1893 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 SLC10A3P09131 477 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 RHBDL3P58872 404 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 RASAL3Q86YV0 1011 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 ANTXR1Q9H6X2 564 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 ATRNL1Q5VV63 1379 aa14.3□□□□□ -0.12
MCF2L-222ENST00000469558 GPR75-ASB3A0A0A6YYF3 556 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 WDHD1O75717 1129 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 HSPA1AP0DMV8 641 aaKnown RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 HSPA1BP0DMV9 641 aaKnown RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 TNFAIP1Q13829 316 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 PRKG1Q13976 671 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 SPTY2D1Q68D10 685 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 DZIP1Q86YF9 867 aaKnown RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
MCF2L-222ENST00000469558 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
MCF2L-222ENST00000469558 USP2O75604 605 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-222ENST00000469558 ECE1P42892 770 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 BTDP43251 543 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 GRM1Q13255 1194 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 FOCADQ5VW36 1801 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 IDI2Q9BXS1 227 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 LRRCC1Q9C099 1032 aa14.28□□□□□ -0.12
MCF2L-222ENST00000469558 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
MCF2L-222ENST00000469558 SIPA1L1O43166 1804 aa14.27□□□□□ -0.12
MCF2L-222ENST00000469558 MAP2K2P36507 400 aa14.27□□□□□ -0.13
MCF2L-222ENST00000469558 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-222ENST00000469558 EXOC6Q8TAG9 804 aa14.27□□□□□ -0.13
MCF2L-222ENST00000469558 CLMNQ96JQ2 1002 aa14.27□□□□□ -0.13
MCF2L-222ENST00000469558 USP40Q9NVE5 1235 aa14.27□□□□□ -0.13
MCF2L-222ENST00000469558 ANGEL1Q9UNK9 670 aaKnown RBP14.27□□□□□ -0.13
MCF2L-222ENST00000469558 FOXN1O15353 648 aa14.26□□□□□ -0.13
MCF2L-222ENST00000469558 NF2P35240 595 aa14.26□□□□□ -0.13
MCF2L-222ENST00000469558 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-222ENST00000469558 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.26□□□□□ -0.13
MCF2L-222ENST00000469558 FAM151AQ8WW52 585 aa14.26□□□□□ -0.13
MCF2L-222ENST00000469558 EDC3Q96F86 508 aaKnown RBP14.26□□□□□ -0.13
MCF2L-222ENST00000469558 RAI14Q9P0K7 980 aa14.26□□□□□ -0.13
MCF2L-222ENST00000469558 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
MCF2L-222ENST00000469558 SALL3Q9BXA9 1300 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 DDX60LQ5H9U9 1706 aaKnown RBP14.25□□□□□ -0.13
MCF2L-222ENST00000469558 IFIT2P09913 472 aaKnown RBP14.25□□□□□ -0.13
MCF2L-222ENST00000469558 SLURP2P0DP57 97 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 GJA5P36382 358 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 TNNI2P48788 182 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 RGS3P49796 1198 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 TCP10Q12799 353 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 NOGQ13253 232 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-222ENST00000469558 SUPT20HL1Q3ZLR7 823 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 OTUD7AQ8TE49 926 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-222ENST00000469558 CCDC102AQ96A19 550 aa14.25□□□□□ -0.13
MCF2L-222ENST00000469558 ATP5JP18859 108 aa14.24□□□□□ -0.13
MCF2L-222ENST00000469558 GSTO1P78417 241 aa14.24□□□□□ -0.13
MCF2L-222ENST00000469558 KIF23Q02241 960 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-222ENST00000469558 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-222ENST00000469558 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-222ENST00000469558 ARMC9Q7Z3E5 817 aa14.24□□□□□ -0.13
MCF2L-222ENST00000469558 SLF2Q8IX21 1173 aa14.24□□□□□ -0.13
MCF2L-222ENST00000469558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.24□□□□□ -0.13
MCF2L-222ENST00000469558 TMOD2Q9NZR1 351 aa14.24□□□□□ -0.13
MCF2L-222ENST00000469558 COL2A1P02458 1487 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-222ENST00000469558 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-222ENST00000469558 IGSF3O75054 1194 aa14.23□□□□□ -0.13
MCF2L-222ENST00000469558 ENTPD3O75355 529 aa14.23□□□□□ -0.13
MCF2L-222ENST00000469558 NPM3O75607 178 aaKnown RBP14.23□□□□□ -0.13
MCF2L-222ENST00000469558 PPP4CP60510 307 aa14.23□□□□□ -0.13
MCF2L-222ENST00000469558 TSHZ3Q63HK5 1081 aa14.23□□□□□ -0.13
MCF2L-222ENST00000469558 NAA16Q6N069 864 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-222ENST00000469558 SH3RF3Q8TEJ3 882 aaPredicted RBP14.23□□□□□ -0.13
MCF2L-222ENST00000469558 HAUS7Q99871 368 aa14.23□□□□□ -0.13
MCF2L-222ENST00000469558 TCRBV5S4A2TA0A5A2 114 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 UNCXA6NJT0 531 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 GOLIM4O00461 696 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-222ENST00000469558 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
MCF2L-222ENST00000469558 IGHDP01880 384 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 CHGBP05060 677 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 LDHCP07864 332 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 MAP2K1Q02750 393 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-222ENST00000469558 AAMPQ13685 434 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 VGLL4Q14135 290 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 SPRYD7Q5W111 196 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 CSRNP1Q96S65 589 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 BOLA2Q9H3K6 86 aa14.22□□□□□ -0.13
MCF2L-222ENST00000469558 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
MCF2L-222ENST00000469558 MYH7P12883 1935 aa14.21□□□□□ -0.13
MCF2L-222ENST00000469558 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms