RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 ITGA6P23229 1130 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 PDE4DQ08499 809 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 TFCP2Q12800 502 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 TRIM28Q13263 835 aaKnown RBP6.46□□□□□ -1.38
ITGA6-208ENST00000469534 G3BP1Q13283 466 aaKnown RBP eCLIP6.46□□□□□ -1.38
ITGA6-208ENST00000469534 PRPF38BQ5VTL8 546 aaKnown RBP6.46□□□□□ -1.38
ITGA6-208ENST00000469534 PRR5LQ6MZQ0 368 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 CLEC4GQ6UXB4 293 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 CHD1LQ86WJ1 897 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 MPNDQ8N594 471 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 CNBD1Q8NA66 436 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 HELBQ8NG08 1087 aaPredicted RBP6.46□□□□□ -1.38
ITGA6-208ENST00000469534 TTLL11Q8NHH1 800 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 GCC1Q96CN9 775 aa6.46□□□□□ -1.38
ITGA6-208ENST00000469534 CCDC8Q9H0W5 538 aaPredicted RBP6.46□□□□□ -1.38
ITGA6-208ENST00000469534 IBTKQ9P2D0 1353 aaPredicted RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 ANKRD18BA2A2Z9 1011 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 CFAP99D6REC4 459 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 SNAP23O00161 211 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 POLRMTO00411 1230 aaKnown RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 SASH1O94885 1247 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 MAP4K4O95819 1239 aaPredicted RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 TM4SF1P30408 202 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 NUCB1Q02818 461 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 PTPN12Q05209 780 aaKnown RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 IFIT5Q13325 482 aaKnown RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 MTX1Q13505 466 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 CCDC57Q2TAC2 916 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 RABL6Q3YEC7 729 aaPredicted RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 RHPN1Q8TCX5 695 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 LRRCC1Q9C099 1032 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 TLR7Q9NYK1 1049 aaKnown RBP6.45□□□□□ -1.38
ITGA6-208ENST00000469534 HDAC5Q9UQL6 1122 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 PARP3Q9Y6F1 533 aa6.45□□□□□ -1.38
ITGA6-208ENST00000469534 TAF5LO75529 589 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 F12P00748 615 aaPredicted RBP6.44□□□□□ -1.38
ITGA6-208ENST00000469534 CSF1RP07333 972 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 ST5P78524 1137 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 TUSC1Q2TAM9 212 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 LINC01559Q495D7 138 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 CCDC152Q4G0S7 254 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 TPTE2Q6XPS3 522 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 AACSQ86V21 672 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 ZNF511Q8NB15 262 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 CELF1Q92879 486 aaKnown RBP6.44□□□□□ -1.38
ITGA6-208ENST00000469534 NEUROD6Q96NK8 337 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 PLA2G12BQ9BX93 195 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 NYXQ9GZU5 481 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 CNNM1Q9NRU3 951 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 MYO5AQ9Y4I1 1855 aaKnown RBP6.44□□□□□ -1.38
ITGA6-208ENST00000469534 NRXN2Q9P2S2 1712 aa6.44□□□□□ -1.38
ITGA6-208ENST00000469534 RIC1Q4ADV7 1423 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 WTIPA6NIX2 430 aaPredicted RBP6.43□□□□□ -1.38
ITGA6-208ENST00000469534 EYA2O00167 538 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 VARSP26640 1264 aaKnown RBP6.43□□□□□ -1.38
ITGA6-208ENST00000469534 CHRNA5P30532 468 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 ADORA1P30542 326 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 METTL24Q5JXM2 366 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 MYSM1Q5VVJ2 828 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 ATG9AQ7Z3C6 839 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 PLEKHM2Q8IWE5 1019 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 FLAD1Q8NFF5 587 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 KIF1BPQ96EK5 621 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 NLRP3Q96P20 1036 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 GPR101Q96P66 508 aaPredicted RBP6.43□□□□□ -1.38
ITGA6-208ENST00000469534 SLC24A3Q9HC58 644 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 COPRSQ9NQ92 184 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 PPP1R1BQ9UD71 204 aaPredicted RBP6.43□□□□□ -1.38
ITGA6-208ENST00000469534 LIMD1Q9UGP4 676 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
ITGA6-208ENST00000469534 NDUFB9Q9Y6M9 179 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 LRP5O75197 1615 aa6.43□□□□□ -1.38
ITGA6-208ENST00000469534 RAB11FIP3O75154 756 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 IFIT2P09913 472 aaKnown RBP6.42□□□□□ -1.38
ITGA6-208ENST00000469534 IGHMBP2P38935 993 aaKnown RBP6.42□□□□□ -1.38
ITGA6-208ENST00000469534 TIMM10P62072 90 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 OLFM4Q6UX06 510 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 LDHAL6AQ6ZMR3 332 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 CCDC125Q86Z20 511 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 ANKRD18AQ8IVF6 992 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 RPGRQ92834 1020 aaKnown RBP6.42□□□□□ -1.38
ITGA6-208ENST00000469534 ZNF622Q969S3 477 aaKnown RBP eCLIP6.42□□□□□ -1.38
ITGA6-208ENST00000469534 EAF2Q96CJ1 260 aaPredicted RBP6.42□□□□□ -1.38
ITGA6-208ENST00000469534 MPHOSPH8Q99549 860 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 DBNDD2Q9BQY9 259 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 WASF2Q9Y6W5 498 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 MYH13Q9UKX3 1938 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 ZNF609O15014 1411 aa6.42□□□□□ -1.38
ITGA6-208ENST00000469534 SLX4Q8IY92 1834 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 LILRB3O75022 631 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 GSPT1P15170 499 aaKnown RBP6.41□□□□□ -1.38
ITGA6-208ENST00000469534 MX1P20591 662 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 IL15P40933 162 aaPredicted RBP6.41□□□□□ -1.38
ITGA6-208ENST00000469534 PDE1AP54750 535 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 CHRNDQ07001 517 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 HSP90AB4PQ58FF6 505 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 TNNI3KQ59H18 835 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
ITGA6-208ENST00000469534 DDX46Q7L014 1031 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms