RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-217ENST00000469223 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
HDAC6-217ENST00000469223 TTF2Q9UNY4 1162 aaKnown RBP16.26■□□□□ 0.19
HDAC6-217ENST00000469223 TAF5LO75529 589 aa16.25■□□□□ 0.19
HDAC6-217ENST00000469223 PPATQ06203 517 aa16.25■□□□□ 0.19
HDAC6-217ENST00000469223 MOGSQ13724 837 aa16.25■□□□□ 0.19
HDAC6-217ENST00000469223 NBPF3Q9H094 633 aa16.25■□□□□ 0.19
HDAC6-217ENST00000469223 C11orf49Q9H6J7 331 aa16.25■□□□□ 0.19
HDAC6-217ENST00000469223 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
HDAC6-217ENST00000469223 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-217ENST00000469223 IRF5Q13568 498 aa16.24■□□□□ 0.19
HDAC6-217ENST00000469223 MFSD14BQ5SR56 506 aa16.24■□□□□ 0.19
HDAC6-217ENST00000469223 C15orf52Q6ZUT6 534 aaKnown RBP16.24■□□□□ 0.19
HDAC6-217ENST00000469223 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
HDAC6-217ENST00000469223 FAM122AQ96E09 287 aa16.24■□□□□ 0.19
HDAC6-217ENST00000469223 CDX2Q99626 313 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-217ENST00000469223 KCNH4Q9UQ05 1017 aa16.24■□□□□ 0.19
HDAC6-217ENST00000469223 DOCK2Q92608 1830 aa16.24■□□□□ 0.19
HDAC6-217ENST00000469223 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
HDAC6-217ENST00000469223 INPP5BP32019 993 aa16.23■□□□□ 0.19
HDAC6-217ENST00000469223 CRKP46108 304 aa16.23■□□□□ 0.19
HDAC6-217ENST00000469223 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
HDAC6-217ENST00000469223 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
HDAC6-217ENST00000469223 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
HDAC6-217ENST00000469223 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
HDAC6-217ENST00000469223 RPAP1Q9BWH6 1393 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-217ENST00000469223 PHIPQ8WWQ0 1821 aa16.22■□□□□ 0.19
HDAC6-217ENST00000469223 PFASO15067 1338 aa16.21■□□□□ 0.19
HDAC6-217ENST00000469223 TMEM265A0A087WTH1 108 aa16.21■□□□□ 0.19
HDAC6-217ENST00000469223 TNFRSF10AO00220 468 aa16.21■□□□□ 0.19
HDAC6-217ENST00000469223 CWF19L2Q2TBE0 894 aaKnown RBP16.21■□□□□ 0.19
HDAC6-217ENST00000469223 MYH13Q9UKX3 1938 aa16.21■□□□□ 0.19
HDAC6-217ENST00000469223 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
HDAC6-217ENST00000469223 DCAF15Q66K64 600 aa16.2■□□□□ 0.18
HDAC6-217ENST00000469223 GPAT2Q6NUI2 795 aa16.2■□□□□ 0.18
HDAC6-217ENST00000469223 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
HDAC6-217ENST00000469223 ZNF341Q9BYN7 854 aa16.2■□□□□ 0.18
HDAC6-217ENST00000469223 DOCK1Q14185 1865 aa16.2■□□□□ 0.18
HDAC6-217ENST00000469223 MIGA2Q7L4E1 593 aa16.19■□□□□ 0.18
HDAC6-217ENST00000469223 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
HDAC6-217ENST00000469223 HMGCRP04035 888 aa16.18■□□□□ 0.18
HDAC6-217ENST00000469223 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-217ENST00000469223 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
HDAC6-217ENST00000469223 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
HDAC6-217ENST00000469223 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
HDAC6-217ENST00000469223 FOSL2P15408 326 aa16.17■□□□□ 0.18
HDAC6-217ENST00000469223 TRIM32Q13049 653 aa16.17■□□□□ 0.18
HDAC6-217ENST00000469223 GRIK5Q16478 980 aa16.17■□□□□ 0.18
HDAC6-217ENST00000469223 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
HDAC6-217ENST00000469223 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-217ENST00000469223 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
HDAC6-217ENST00000469223 TJAP1Q5JTD0 557 aa16.16■□□□□ 0.18
HDAC6-217ENST00000469223 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
HDAC6-217ENST00000469223 CCDC146Q8IYE0 955 aa16.16■□□□□ 0.18
HDAC6-217ENST00000469223 COA7Q96BR5 231 aa16.16■□□□□ 0.18
HDAC6-217ENST00000469223 LOC285556D6RIA3 1793 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 ANKRD18BA2A2Z9 1011 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 H7C1W4 665 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 LRRC26Q2I0M4 334 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-217ENST00000469223 PLA2G12BQ9BX93 195 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 SEMA6BQ9H3T3 888 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 HMX1Q9NP08 348 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-217ENST00000469223 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
HDAC6-217ENST00000469223 PLIN1O60240 522 aa16.14■□□□□ 0.17
HDAC6-217ENST00000469223 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
HDAC6-217ENST00000469223 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
HDAC6-217ENST00000469223 TDRD7Q8NHU6 1098 aaKnown RBP16.14■□□□□ 0.17
HDAC6-217ENST00000469223 MUC6Q6W4X9 2439 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 CSF1RP07333 972 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 GYG1P46976 350 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 NOL9Q5SY16 702 aaKnown RBP16.13■□□□□ 0.17
HDAC6-217ENST00000469223 ANKRD13CQ8N6S4 541 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 TEKT1Q969V4 418 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 LBHD1Q9BQE6 289 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-217ENST00000469223 TTYH1Q9H313 450 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-217ENST00000469223 ZNF112Q9UJU3 913 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 MYO9BQ13459 2157 aa16.13■□□□□ 0.17
HDAC6-217ENST00000469223 CHD9Q3L8U1 2897 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 A0A0G2JLL6 359 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-217ENST00000469223 COL6A1P12109 1028 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 CASP7P55210 303 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 MAP3K12Q12852 859 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 FKBP1CQ5VVH2 108 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 PRRT2Q7Z6L0 340 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-217ENST00000469223 USP38Q8NB14 1042 aa16.12■□□□□ 0.17
HDAC6-217ENST00000469223 ATAD5Q96QE3 1844 aa16.11■□□□□ 0.17
HDAC6-217ENST00000469223 CXCL11O14625 94 aa16.11■□□□□ 0.17
HDAC6-217ENST00000469223 CHAF1AQ13111 956 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-217ENST00000469223 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-217ENST00000469223 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
HDAC6-217ENST00000469223 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-217ENST00000469223 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
HDAC6-217ENST00000469223 HIBADHP31937 336 aaKnown RBP16.1■□□□□ 0.17
HDAC6-217ENST00000469223 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
HDAC6-217ENST00000469223 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
HDAC6-217ENST00000469223 TRIB2Q92519 343 aa16.1■□□□□ 0.17
HDAC6-217ENST00000469223 ZDHHC15Q96MV8 337 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms