RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 MYO1BO43795 1136 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 USP17L8P0C7I0 530 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 POTEJP0CG39 1038 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 ADD2P35612 726 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 GMPSP49915 693 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-216ENST00000468949 UBE3CQ15386 1083 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 CWC27Q6UX04 472 aaKnown RBP9.76□□□□□ -0.85
HDAC6-216ENST00000468949 KIAA1211Q6ZU35 1233 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 DDRGK1Q96HY6 314 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 MXD3Q9BW11 206 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 UPF2Q9HAU5 1272 aaKnown RBP9.76□□□□□ -0.85
HDAC6-216ENST00000468949 KCNQ5Q9NR82 932 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 GPRC5DQ9NZD1 345 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 TMOD2Q9NZR1 351 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 MROH7-TTC4A0A0A0MT08 1334 aa9.76□□□□□ -0.85
HDAC6-216ENST00000468949 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 H7C1D1 291 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 PLCG2P16885 1265 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 CHMLP26374 656 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 MNX1P50219 401 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-216ENST00000468949 MMP14P50281 582 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 NMIQ13287 307 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-216ENST00000468949 DLGAP5Q15398 846 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 MICALL2Q8IY33 904 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 CERS5Q8N5B7 392 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 MIGA1Q8NAN2 632 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 NSUN4Q96CB9 384 aaKnown RBP9.75□□□□□ -0.85
HDAC6-216ENST00000468949 HELLSQ9NRZ9 838 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
HDAC6-216ENST00000468949 AKAP11Q9UKA4 1901 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 REC8O95072 547 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 MBD4O95243 580 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 EPS15P42566 896 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 BTDP43251 543 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 CRKP46108 304 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 NUBP1P53384 320 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
HDAC6-216ENST00000468949 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 MCMDC2Q4G0Z9 681 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 ZMYM1Q5SVZ6 1142 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 USP50Q70EL3 339 aaPredicted RBP9.74□□□□□ -0.85
HDAC6-216ENST00000468949 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 DPF2Q92785 391 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 FAM227BQ96M60 508 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
HDAC6-216ENST00000468949 ADARB2Q9NS39 739 aaKnown RBP9.74□□□□□ -0.85
HDAC6-216ENST00000468949 AATFQ9NY61 560 aaKnown RBP eCLIP9.74□□□□□ -0.85
HDAC6-216ENST00000468949 DOCK2Q92608 1830 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
HDAC6-216ENST00000468949 CEP350Q5VT06 3117 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 A0A0D9SFI3 127 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 GPAA1O43292 621 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 APPP05067 770 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 GNAT2P19087 354 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 USP5P45974 858 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 CFAP100Q494V2 611 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 HHIPL2Q6UWX4 724 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 ESYT1Q9BSJ8 1104 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 NACAP1Q9BZK3 213 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 MYOZ2Q9NPC6 264 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 CNOT7Q9UIV1 285 aaKnown RBP9.73□□□□□ -0.85
HDAC6-216ENST00000468949 DAGLAQ9Y4D2 1042 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
HDAC6-216ENST00000468949 TRPM7Q96QT4 1865 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 THSD7BQ9C0I4 1608 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 M0R2C6 588 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 MCCP23508 829 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 GRIK5Q16478 980 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 RBM26Q5T8P6 1007 aaKnown RBP9.72□□□□□ -0.85
HDAC6-216ENST00000468949 TEX11Q8IYF3 940 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 OSBP2Q969R2 916 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 ZDHHC15Q96MV8 337 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 GAKO14976 1311 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 MYH7P12883 1935 aa9.72□□□□□ -0.85
HDAC6-216ENST00000468949 TCRBV5S4A2TA0A5A2 114 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 SGSM2O43147 1006 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 TDO2P48775 406 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 TBC1D10BQ4KMP7 808 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-216ENST00000468949 MAP1SQ66K74 1059 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-216ENST00000468949 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 LCORLQ8N3X6 602 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 KLRG1Q96E93 195 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 FAM163AQ96GL9 167 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-216ENST00000468949 GMLQ99445 158 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 MRIQ9BWK5 157 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 PUS7LQ9H0K6 701 aaKnown RBP9.71□□□□□ -0.86
HDAC6-216ENST00000468949 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 USP40Q9NVE5 1235 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 SLC4A4Q9Y6R1 1079 aa9.71□□□□□ -0.86
HDAC6-216ENST00000468949 GPR75-ASB3A0A0A6YYF3 556 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-216ENST00000468949 CHGBP05060 677 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 TNNI2P48788 182 aa9.7□□□□□ -0.86
HDAC6-216ENST00000468949 ZNF280AP59817 542 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-216ENST00000468949 DYNLL1P63167 89 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms