RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 GORABQ5T7V8 394 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-203ENST00000468565 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 FAM83AQ86UY5 434 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 EXOC6Q8TAG9 804 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 COG6Q9Y2V7 657 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 DAGLAQ9Y4D2 1042 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
COL27A1-203ENST00000468565 DIXDC1Q155Q3 683 aa17.77■□□□□ 0.44
COL27A1-203ENST00000468565 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
COL27A1-203ENST00000468565 RPAP1Q9BWH6 1393 aaPredicted RBP17.77■□□□□ 0.43
COL27A1-203ENST00000468565 MAST2Q6P0Q8 1798 aa17.77■□□□□ 0.43
COL27A1-203ENST00000468565 UQCRFS1P1P0C7P4 283 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
COL27A1-203ENST00000468565 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-203ENST00000468565 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 CASP8AP2Q9UKL3 1982 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 USP2O75604 605 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-203ENST00000468565 SPATA5Q8NB90 893 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 TMEM39BQ9GZU3 492 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 HMG20BQ9P0W2 317 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 FZD1Q9UP38 647 aa17.76■□□□□ 0.43
COL27A1-203ENST00000468565 CACNB3P54284 484 aa17.75■□□□□ 0.43
COL27A1-203ENST00000468565 TNS4Q8IZW8 715 aa17.75■□□□□ 0.43
COL27A1-203ENST00000468565 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
COL27A1-203ENST00000468565 GAKO14976 1311 aa17.75■□□□□ 0.43
COL27A1-203ENST00000468565 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
COL27A1-203ENST00000468565 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
COL27A1-203ENST00000468565 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 SLF2Q8IX21 1173 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 DOCK2Q92608 1830 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 CCDC158Q5M9N0 1113 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 CDC42EP5Q6NZY7 148 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-203ENST00000468565 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 FAM163AQ96GL9 167 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-203ENST00000468565 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-203ENST00000468565 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
COL27A1-203ENST00000468565 MCAMP43121 646 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 ANKRD13AQ8IZ07 590 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 HOOK2Q96ED9 719 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 SLC10A4Q96EP9 437 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 TSKSQ9UJT2 592 aa17.73■□□□□ 0.43
COL27A1-203ENST00000468565 HMMRO75330 724 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 TTC39AQ5SRH9 613 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 SPRYD7Q5W111 196 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 EXOC6BQ9Y2D4 811 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 ZBTB48P10074 688 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-203ENST00000468565 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 PI16Q6UXB8 463 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 CLMNQ96JQ2 1002 aa17.72■□□□□ 0.43
COL27A1-203ENST00000468565 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
COL27A1-203ENST00000468565 MROH7-TTC4A0A0A0MT08 1334 aa17.71■□□□□ 0.43
COL27A1-203ENST00000468565 TM4SF4P48230 202 aa17.71■□□□□ 0.43
COL27A1-203ENST00000468565 SREBF2Q12772 1141 aa17.71■□□□□ 0.43
COL27A1-203ENST00000468565 EAF2Q96CJ1 260 aaPredicted RBP17.71■□□□□ 0.43
COL27A1-203ENST00000468565 USP40Q9NVE5 1235 aa17.71■□□□□ 0.43
COL27A1-203ENST00000468565 MECOMQ03112 1051 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 SIRT2Q8IXJ6 389 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 WNK4Q96J92 1243 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 RFX7Q2KHR2 1363 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 IGSF3O75054 1194 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 GSTO1P78417 241 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 MKRN3Q13064 507 aaKnown RBP17.7■□□□□ 0.42
COL27A1-203ENST00000468565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.7■□□□□ 0.425e-13■■□□□ 11.4
COL27A1-203ENST00000468565 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
COL27A1-203ENST00000468565 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
COL27A1-203ENST00000468565 CDK5RAP2Q96SN8 1893 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 TRPA1O75762 1119 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 LDHCP07864 332 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 NFIAQ12857 509 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 CCDC8Q9H0W5 538 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-203ENST00000468565 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
COL27A1-203ENST00000468565 FAM198AQ9UFP1 575 aa17.69■□□□□ 0.42
COL27A1-203ENST00000468565 GPR75-ASB3A0A0A6YYF3 556 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 MANSC4A6NHS7 340 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-203ENST00000468565 BTDP43251 543 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 DCAF15Q66K64 600 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-203ENST00000468565 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 CRBNQ96SW2 442 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 RAI14Q9P0K7 980 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 ENTPD3O75355 529 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 MAP4K4O95819 1239 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-203ENST00000468565 INHBEP58166 350 aa17.68■□□□□ 0.42
COL27A1-203ENST00000468565 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms