RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 CHAF1AQ13111 956 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-205ENST00000468338 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A6-205ENST00000468338 PDE3AQ14432 1141 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 WDR66Q8TBY9 1149 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 SCAF8Q9UPN6 1271 aaKnown RBP13.79□□□□□ -0.2
COL4A6-205ENST00000468338 AOX1Q06278 1338 aa13.79□□□□□ -0.2
COL4A6-205ENST00000468338 CRKP46108 304 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 HUNKP57058 714 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 FOXK1P85037 733 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 CYP4F22Q6NT55 531 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 XAGE2Q96GT9 111 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
COL4A6-205ENST00000468338 DDX19BQ9UMR2 479 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 COG6Q9Y2V7 657 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 PDS5AQ29RF7 1337 aaKnown RBP13.78□□□□□ -0.2
COL4A6-205ENST00000468338 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 PAPPA2Q9BXP8 1791 aa13.78□□□□□ -0.2
COL4A6-205ENST00000468338 MYO1BO43795 1136 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 HSPA1AP0DMV8 641 aaKnown RBP13.77□□□□□ -0.21
COL4A6-205ENST00000468338 HSPA1BP0DMV9 641 aaKnown RBP13.77□□□□□ -0.21
COL4A6-205ENST00000468338 MAP2K2P36507 400 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 HHIPL2Q6UWX4 724 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 DEFB129Q9H1M3 183 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 WBP1LQ9NX94 342 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
COL4A6-205ENST00000468338 MAST3O60307 1309 aa13.76□□□□□ -0.21
COL4A6-205ENST00000468338 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
COL4A6-205ENST00000468338 RASGRF1Q13972 1273 aa13.76□□□□□ -0.21
COL4A6-205ENST00000468338 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
COL4A6-205ENST00000468338 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
COL4A6-205ENST00000468338 RGMBQ6NW40 437 aa13.76□□□□□ -0.21
COL4A6-205ENST00000468338 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
COL4A6-205ENST00000468338 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
COL4A6-205ENST00000468338 FAM155AB1AL88 458 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
COL4A6-205ENST00000468338 SIRT2Q8IXJ6 389 aa13.75□□□□□ -0.21
COL4A6-205ENST00000468338 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 TDRD3Q9H7E2 651 aaKnown RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 ZNF70Q9UC06 446 aaPredicted RBP13.75□□□□□ -0.21
COL4A6-205ENST00000468338 ARID4AP29374 1257 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-205ENST00000468338 PRDX5P30044 214 aa13.74□□□□□ -0.21
COL4A6-205ENST00000468338 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-205ENST00000468338 TNNI3KQ59H18 835 aa13.74□□□□□ -0.21
COL4A6-205ENST00000468338 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
COL4A6-205ENST00000468338 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
COL4A6-205ENST00000468338 FPGT-TNNI3KV9GXZ4 949 aa13.74□□□□□ -0.21
COL4A6-205ENST00000468338 AKAP11Q9UKA4 1901 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 AOC2O75106 756 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 CLCN6P51797 869 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 NOGQ13253 232 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 RASA3Q14644 834 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 MAP3K11Q16584 847 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 LDLRAD1Q5T700 205 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 FKBP1CQ5VVH2 108 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 MOB2Q70IA6 237 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
COL4A6-205ENST00000468338 ZNF512BQ96KM6 892 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-205ENST00000468338 TEPSINQ96N21 525 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 HMG20BQ9P0W2 317 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 SSC5DA1L4H1 1573 aa13.73□□□□□ -0.21
COL4A6-205ENST00000468338 TRIM66O15016 1216 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 LDHBP07195 334 aaKnown RBP13.72□□□□□ -0.21
COL4A6-205ENST00000468338 SLC10A3P09131 477 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 NF2P35240 595 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 PLPP6Q8IY26 295 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 EAF2Q96CJ1 260 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-205ENST00000468338 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
COL4A6-205ENST00000468338 ZIC5Q96T25 663 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
COL4A6-205ENST00000468338 GAKO14976 1311 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 MYH2Q9UKX2 1941 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 UNCXA6NJT0 531 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 UBE2Q2LH0YL09 131 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 FOXN1O15353 648 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 MCAMP43121 646 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 ZNF157P51786 506 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-205ENST00000468338 OS9Q13438 667 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-205ENST00000468338 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 SUPT20HL1Q3ZLR7 823 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
COL4A6-205ENST00000468338 FAM83AQ86UY5 434 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 ERC1Q8IUD2 1116 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 SPATA5Q8NB90 893 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 DBNDD2Q9BQY9 259 aa13.71□□□□□ -0.21
COL4A6-205ENST00000468338 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 PDE4DQ08499 809 aa13.7□□□□□ -0.22
COL4A6-205ENST00000468338 GRM1Q13255 1194 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms