RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 CDC42EP5Q6NZY7 148 aa22.86■■□□□ 1.25
YBX1-204ENST00000467957 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
YBX1-204ENST00000467957 CLASRPQ8N2M8 674 aaKnown RBP22.86■■□□□ 1.25
YBX1-204ENST00000467957 IL1RAPL2Q9NP60 686 aa22.86■■□□□ 1.25
YBX1-204ENST00000467957 UNCXA6NJT0 531 aa22.85■■□□□ 1.25
YBX1-204ENST00000467957 MECOMQ03112 1051 aa22.85■■□□□ 1.25
YBX1-204ENST00000467957 TMEM39BQ9GZU3 492 aa22.85■■□□□ 1.25
YBX1-204ENST00000467957 ANGEL1Q9UNK9 670 aaKnown RBP22.85■■□□□ 1.25
YBX1-204ENST00000467957 GSTO1P78417 241 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 PRKG1Q13976 671 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 RASAL3Q86YV0 1011 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 ZNF384Q8TF68 577 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 AIDAQ96BJ3 306 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 NSUN4Q96CB9 384 aaKnown RBP22.84■■□□□ 1.25
YBX1-204ENST00000467957 SNRKQ9NRH2 765 aa22.84■■□□□ 1.25
YBX1-204ENST00000467957 RPAP1Q9BWH6 1393 aaPredicted RBP22.84■■□□□ 1.25
YBX1-204ENST00000467957 MROH7-TTC4A0A0A0MT08 1334 aa22.83■■□□□ 1.25
YBX1-204ENST00000467957 APBB1O00213 710 aa22.83■■□□□ 1.25
YBX1-204ENST00000467957 CYP2E1P05181 493 aaPredicted RBP22.83■■□□□ 1.25
YBX1-204ENST00000467957 LDHCP07864 332 aa22.83■■□□□ 1.25
YBX1-204ENST00000467957 USP40Q9NVE5 1235 aa22.83■■□□□ 1.25
YBX1-204ENST00000467957 LRP2BPQ9P2M1 347 aa22.83■■□□□ 1.25
YBX1-204ENST00000467957 GPR75-ASB3A0A0A6YYF3 556 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
YBX1-204ENST00000467957 ZAP70P43403 619 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 CDAN1Q8IWY9 1227 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 FAM151AQ8WW52 585 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 ZIC5Q96T25 663 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 RAI14Q9P0K7 980 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 FZD1Q9UP38 647 aa22.82■■□□□ 1.24
YBX1-204ENST00000467957 FOXN1O15353 648 aa22.81■■□□□ 1.24
YBX1-204ENST00000467957 IREB2P48200 963 aaKnown RBP22.81■■□□□ 1.24
YBX1-204ENST00000467957 CRBNQ96SW2 442 aa22.81■■□□□ 1.24
YBX1-204ENST00000467957 IDI2Q9BXS1 227 aa22.81■■□□□ 1.24
YBX1-204ENST00000467957 DCTPP1Q9H773 170 aa22.81■■□□□ 1.24
YBX1-204ENST00000467957 MAST2Q6P0Q8 1798 aa22.81■■□□□ 1.24
YBX1-204ENST00000467957 RFX7Q2KHR2 1363 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 MAP4K4O95819 1239 aaPredicted RBP22.8■■□□□ 1.24
YBX1-204ENST00000467957 IFIT2P09913 472 aaKnown RBP22.8■■□□□ 1.24
YBX1-204ENST00000467957 BTDP43251 543 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 KIF23Q02241 960 aaPredicted RBP22.8■■□□□ 1.24
YBX1-204ENST00000467957 NFIAQ12857 509 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 REM2Q8IYK8 340 aaPredicted RBP22.8■■□□□ 1.24
YBX1-204ENST00000467957 HOOK2Q96ED9 719 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 BEGAINQ9BUH8 593 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 LRRCC1Q9C099 1032 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 FAM198AQ9UFP1 575 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 PCDHB15Q9Y5E8 787 aa22.8■■□□□ 1.24
YBX1-204ENST00000467957 CTCFP49711 727 aaPredicted RBP22.79■■□□□ 1.24
YBX1-204ENST00000467957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.79■■□□□ 1.24
YBX1-204ENST00000467957 CA12O43570 354 aa22.78■■□□□ 1.24
YBX1-204ENST00000467957 ENTPD3O75355 529 aa22.78■■□□□ 1.24
YBX1-204ENST00000467957 ANKRD13AQ8IZ07 590 aa22.78■■□□□ 1.24
YBX1-204ENST00000467957 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
YBX1-204ENST00000467957 RHBDL3P58872 404 aa22.77■■□□□ 1.24
YBX1-204ENST00000467957 AAMPQ13685 434 aa22.77■■□□□ 1.24
YBX1-204ENST00000467957 NAA16Q6N069 864 aaPredicted RBP22.77■■□□□ 1.24
YBX1-204ENST00000467957 SLC10A4Q96EP9 437 aa22.77■■□□□ 1.24
YBX1-204ENST00000467957 MYO5AQ9Y4I1 1855 aaKnown RBP22.77■■□□□ 1.24
YBX1-204ENST00000467957 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
YBX1-204ENST00000467957 WDHD1O75717 1129 aaPredicted RBP22.76■■□□□ 1.23
YBX1-204ENST00000467957 RGS3P49796 1198 aa22.76■■□□□ 1.23
YBX1-204ENST00000467957 TCP10Q12799 353 aa22.76■■□□□ 1.23
YBX1-204ENST00000467957 TMED8Q6PL24 325 aaPredicted RBP22.76■■□□□ 1.23
YBX1-204ENST00000467957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.76■■□□□ 1.23
YBX1-204ENST00000467957 CLMNQ96JQ2 1002 aa22.76■■□□□ 1.23
YBX1-204ENST00000467957 CSRNP1Q96S65 589 aa22.76■■□□□ 1.23
YBX1-204ENST00000467957 OTOFQ9HC10 1997 aa22.76■■□□□ 1.23
YBX1-204ENST00000467957 SPRYD7Q5W111 196 aa22.75■■□□□ 1.23
YBX1-204ENST00000467957 DCAF15Q66K64 600 aa22.75■■□□□ 1.23
YBX1-204ENST00000467957 DOCK2Q92608 1830 aa22.75■■□□□ 1.23
YBX1-204ENST00000467957 ZBTB48P10074 688 aaPredicted RBP22.74■■□□□ 1.23
YBX1-204ENST00000467957 HSPA8P11142 646 aaKnown RBP22.74■■□□□ 1.23
YBX1-204ENST00000467957 PPP4CP60510 307 aa22.74■■□□□ 1.23
YBX1-204ENST00000467957 MAP3K9P80192 1104 aa22.74■■□□□ 1.23
YBX1-204ENST00000467957 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
YBX1-204ENST00000467957 ZFPM1Q8IX07 1006 aa22.74■■□□□ 1.23
YBX1-204ENST00000467957 ANTXR1Q9H6X2 564 aa22.74■■□□□ 1.23
YBX1-204ENST00000467957 PRDM10Q9NQV6 1147 aa22.74■■□□□ 1.23
YBX1-204ENST00000467957 LAMB1P07942 1786 aa22.73■■□□□ 1.23
YBX1-204ENST00000467957 TTF1Q15361 905 aaPredicted RBP22.73■■□□□ 1.23
YBX1-204ENST00000467957 WNK4Q96J92 1243 aa22.73■■□□□ 1.23
YBX1-204ENST00000467957 NOL10Q9BSC4 688 aaKnown RBP22.73■■□□□ 1.23
YBX1-204ENST00000467957 DDX4Q9NQI0 724 aaKnown RBP22.73■■□□□ 1.23
YBX1-204ENST00000467957 SAGE1Q9NXZ1 904 aa22.73■■□□□ 1.23
YBX1-204ENST00000467957 NDUFB9Q9Y6M9 179 aa22.73■■□□□ 1.23
YBX1-204ENST00000467957 SMARCA5O60264 1052 aaPredicted RBP22.72■■□□□ 1.23
YBX1-204ENST00000467957 IDH1O75874 414 aaKnown RBP22.72■■□□□ 1.23
YBX1-204ENST00000467957 BAG3O95817 575 aa22.72■■□□□ 1.23
YBX1-204ENST00000467957 PLCG2P16885 1265 aa22.72■■□□□ 1.23
YBX1-204ENST00000467957 ATP5JP18859 108 aa22.72■■□□□ 1.23
YBX1-204ENST00000467957 TM4SF4P48230 202 aa22.72■■□□□ 1.23
YBX1-204ENST00000467957 ZNF341Q9BYN7 854 aa22.72■■□□□ 1.23
YBX1-204ENST00000467957 LBX1P52954 281 aa22.71■■□□□ 1.23
YBX1-204ENST00000467957 MAP3K12Q12852 859 aa22.71■■□□□ 1.23
YBX1-204ENST00000467957 ADGRA1Q86SQ6 560 aa22.71■■□□□ 1.23
YBX1-204ENST00000467957 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
YBX1-204ENST00000467957 ATRNL1Q5VV63 1379 aa22.71■■□□□ 1.23
YBX1-204ENST00000467957 COL2A1P02458 1487 aaPredicted RBP22.71■■□□□ 1.23
YBX1-204ENST00000467957 AK9Q5TCS8 1911 aa22.7■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms