RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 ALDH1A1P00352 501 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 ZFPM1Q8IX07 1006 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 BRI3BPQ8WY22 251 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 ZKSCAN4Q969J2 545 aaPredicted RBP18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 TMOD2Q9NZR1 351 aa18.34■□□□□ 0.53
ATPAF2-204ENST00000467560 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 TCP10Q12799 353 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 OTUD5Q96G74 571 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 XAGE2Q96GT9 111 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 WRNIP1Q96S55 665 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 DENND2AQ9ULE3 1009 aa18.33■□□□□ 0.52
ATPAF2-204ENST00000467560 SEMA3EO15041 775 aa18.32■□□□□ 0.52
ATPAF2-204ENST00000467560 GNAI2P04899 355 aa18.32■□□□□ 0.52
ATPAF2-204ENST00000467560 FAM151AQ8WW52 585 aa18.32■□□□□ 0.52
ATPAF2-204ENST00000467560 USP40Q9NVE5 1235 aa18.32■□□□□ 0.52
ATPAF2-204ENST00000467560 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 SPDYE5A6NIY4 337 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 ZBTB22O15209 634 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 INPP5BP32019 993 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 CSADQ9Y600 493 aa18.31■□□□□ 0.52
ATPAF2-204ENST00000467560 CCL15-CCL14A0A0B4J2E2 113 aa18.3■□□□□ 0.52
ATPAF2-204ENST00000467560 RLBP1P12271 317 aa18.3■□□□□ 0.52
ATPAF2-204ENST00000467560 PKN2Q16513 984 aaKnown RBP18.3■□□□□ 0.52
ATPAF2-204ENST00000467560 CCL15Q16663 113 aa18.3■□□□□ 0.52
ATPAF2-204ENST00000467560 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
ATPAF2-204ENST00000467560 CENPFP49454 3210 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 GAKO14976 1311 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 IRF6O14896 467 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 SLURP2P0DP57 97 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 FBXO46Q6PJ61 603 aaPredicted RBP18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 OTOP1Q7RTM1 612 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 CD99L2Q8TCZ2 262 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 ABCF2Q9UG63 623 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
ATPAF2-204ENST00000467560 GTF2A2P52657 109 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 SH3BP5LQ7L8J4 393 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 ZNF341Q9BYN7 854 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 ZNF112Q9UJU3 913 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 AKAP2Q9Y2D5 859 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
ATPAF2-204ENST00000467560 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
ATPAF2-204ENST00000467560 POLA2Q14181 598 aa18.27■□□□□ 0.52
ATPAF2-204ENST00000467560 MVPQ14764 893 aaKnown RBP18.27■□□□□ 0.52
ATPAF2-204ENST00000467560 TBC1D9Q6ZT07 1266 aa18.27■□□□□ 0.52
ATPAF2-204ENST00000467560 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.51
ATPAF2-204ENST00000467560 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 RGS3P49796 1198 aa18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 MECOMQ03112 1051 aa18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 DCAF15Q66K64 600 aa18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 DDX4Q9NQI0 724 aaKnown RBP18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 PDE4DIPQ5VU43 2346 aa18.26■□□□□ 0.51
ATPAF2-204ENST00000467560 BTBD19C9JJ37 291 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 BTDP43251 543 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 G3BP1Q13283 466 aaKnown RBP eCLIP18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 PPIL2Q13356 520 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 TAF1CQ15572 869 aaPredicted RBP18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 DZIP1Q86YF9 867 aaKnown RBP18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 ZGPATQ8N5A5 531 aaKnown RBP18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 HOOK2Q96ED9 719 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 IDI2Q9BXS1 227 aa18.25■□□□□ 0.51
ATPAF2-204ENST00000467560 BRCA2P51587 3418 aa18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 DDTLA6NHG4 134 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 ARID4AP29374 1257 aaPredicted RBP18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 MCAMP43121 646 aa18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 SP3Q02447 781 aa18.24■□□□□ 0.51
ATPAF2-204ENST00000467560 MROH7-TTC4A0A0A0MT08 1334 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 PHF20L1A8MW92 1017 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 CETPP11597 493 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 RHBDL3P58872 404 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 PPATQ06203 517 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 SNAPC2Q13487 334 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 MOGSQ13724 837 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 PTPN22Q9Y2R2 807 aa18.23■□□□□ 0.51
ATPAF2-204ENST00000467560 GPR75-ASB3A0A0A6YYF3 556 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 ENTPD3O75355 529 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 PICALMQ13492 652 aa18.22■□□□□ 0.51
ATPAF2-204ENST00000467560 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms