RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 SCN9AQ15858 1988 aa9.59□□□□□ -0.87
SPTA1-204ENST00000467387 PITPNM2Q9BZ72 1349 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 ZNF609O15014 1411 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 USP17L3A6NCW0 530 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 USP17L4A6NCW7 530 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 SREBF2Q12772 1141 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 PKN2Q16513 984 aaKnown RBP9.58□□□□□ -0.88
SPTA1-204ENST00000467387 USP17L1Q7RTZ2 530 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 ZNF296Q8WUU4 475 aaPredicted RBP9.58□□□□□ -0.88
SPTA1-204ENST00000467387 ZNF516Q92618 1163 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
SPTA1-204ENST00000467387 SLC27A5Q9Y2P5 690 aa9.58□□□□□ -0.88
SPTA1-204ENST00000467387 MOXD2PA6NHM9 499 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 PDE8AO60658 829 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 NR1I2O75469 434 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 SASH1O94885 1247 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 DDX58O95786 925 aaKnown RBP9.57□□□□□ -0.88
SPTA1-204ENST00000467387 ATP2B4P23634 1241 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 KCNC4Q03721 635 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 PRKG1Q13976 671 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 PRAMEF18Q5VWM3 479 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 ERICH6BQ5W0A0 696 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 SCUBE3Q8IX30 993 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
SPTA1-204ENST00000467387 RUNDC1Q96C34 613 aa9.57□□□□□ -0.88
SPTA1-204ENST00000467387 CDC5LQ99459 802 aaKnown RBP9.57□□□□□ -0.88
SPTA1-204ENST00000467387 POLR2AP24928 1970 aaKnown RBP9.57□□□□□ -0.88
SPTA1-204ENST00000467387 MYBBP1AQ9BQG0 1328 aaKnown RBP9.56□□□□□ -0.88
SPTA1-204ENST00000467387 MED23Q9ULK4 1368 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 PCCAP05165 728 aaPredicted RBP9.56□□□□□ -0.88
SPTA1-204ENST00000467387 GUCA2AQ02747 115 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 TRIM28Q13263 835 aaKnown RBP9.56□□□□□ -0.88
SPTA1-204ENST00000467387 FBXO46Q6PJ61 603 aaPredicted RBP9.56□□□□□ -0.88
SPTA1-204ENST00000467387 ARMC9Q7Z3E5 817 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 PODNQ7Z5L7 613 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 CCDC191Q8NCU4 936 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 PLA2G2EQ9NZK7 142 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
SPTA1-204ENST00000467387 GPR25O00155 361 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 ELL2O00472 640 aaPredicted RBP9.55□□□□□ -0.88
SPTA1-204ENST00000467387 FKTNO75072 461 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 NDUFV2P19404 249 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 KCNJ4P48050 445 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 CTSWP56202 376 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 CALD1Q05682 793 aaKnown RBP9.55□□□□□ -0.88
SPTA1-204ENST00000467387 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 APOBEC3FQ8IUX4 373 aaKnown RBP9.55□□□□□ -0.88
SPTA1-204ENST00000467387 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 MXD3Q9BW11 206 aa9.55□□□□□ -0.88
SPTA1-204ENST00000467387 TLL1O43897 1013 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 GJA5P36382 358 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 NEXNQ0ZGT2 675 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 GCC1Q96CN9 775 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 GMLQ99445 158 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 PHAXQ9H814 394 aaKnown RBP9.54□□□□□ -0.88
SPTA1-204ENST00000467387 PSME4Q14997 1843 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 SPEF2Q9C093 1822 aa9.54□□□□□ -0.88
SPTA1-204ENST00000467387 WNT10BO00744 389 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 SPTLC1O15269 473 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 ALDH1A1P00352 501 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 FDX1P10109 184 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 IGHMBP2P38935 993 aaKnown RBP9.53□□□□□ -0.88
SPTA1-204ENST00000467387 GNAI1P63096 354 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 SH3D19Q5HYK7 790 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 DACT2Q5SW24 774 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 KIAA0825Q8IV33 1275 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 GREM2Q9H772 168 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 PCDHGC3Q9UN70 934 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 ANGEL1Q9UNK9 670 aaKnown RBP9.53□□□□□ -0.88
SPTA1-204ENST00000467387 MAP3K2Q9Y2U5 619 aa9.53□□□□□ -0.88
SPTA1-204ENST00000467387 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
SPTA1-204ENST00000467387 CCT4P50991 539 aaKnown RBP9.52□□□□□ -0.89
SPTA1-204ENST00000467387 PTPN12Q05209 780 aaKnown RBP9.52□□□□□ -0.89
SPTA1-204ENST00000467387 STRIP1Q5VSL9 837 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 CCDC30Q5VVM6 783 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 METTL22Q9BUU2 404 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-204ENST00000467387 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 COA1Q9GZY4 146 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 IFT57Q9NWB7 429 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
SPTA1-204ENST00000467387 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
SPTA1-204ENST00000467387 MANSC4A6NHS7 340 aaPredicted RBP9.51□□□□□ -0.89
SPTA1-204ENST00000467387 TM4SF4P48230 202 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
SPTA1-204ENST00000467387 DLGAP5Q15398 846 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 Q3C1V9 767 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
SPTA1-204ENST00000467387 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 BRICD5Q6PL45 260 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 UBE3BQ7Z3V4 1068 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 SLC10A4Q96EP9 437 aa9.51□□□□□ -0.89
SPTA1-204ENST00000467387 MPHOSPH8Q99549 860 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms