RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 MAGEB6P1A0A0J9YX57 407 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 WNT10BO00744 389 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 MYO1BO43795 1136 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 BTDP43251 543 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 NMIQ13287 307 aaPredicted RBP17.72■□□□□ 0.43
DDX56-208ENST00000467318 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 AIDAQ96BJ3 306 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
DDX56-208ENST00000467318 FAM227BQ96M60 508 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 AATFQ9NY61 560 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDX56-208ENST00000467318 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
DDX56-208ENST00000467318 PCDHAC2Q9Y5I4 1007 aa17.72■□□□□ 0.43
DDX56-208ENST00000467318 SCN4AP35499 1836 aa17.71■□□□□ 0.43
DDX56-208ENST00000467318 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
DDX56-208ENST00000467318 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
DDX56-208ENST00000467318 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.43
DDX56-208ENST00000467318 C8orf34Q49A92 452 aa17.71■□□□□ 0.43
DDX56-208ENST00000467318 PRMT6Q96LA8 375 aaPredicted RBP17.71■□□□□ 0.43
DDX56-208ENST00000467318 RIOK1Q9BRS2 568 aaKnown RBP17.71■□□□□ 0.43
DDX56-208ENST00000467318 RAD50Q92878 1312 aa17.71■□□□□ 0.43
DDX56-208ENST00000467318 A0A0D9SFI3 127 aa17.71■□□□□ 0.42
DDX56-208ENST00000467318 EGFRP00533 1210 aa17.71■□□□□ 0.42
DDX56-208ENST00000467318 EPHX2P34913 555 aa17.71■□□□□ 0.42
DDX56-208ENST00000467318 TBC1D10BQ4KMP7 808 aaPredicted RBP17.71■□□□□ 0.42
DDX56-208ENST00000467318 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.42
DDX56-208ENST00000467318 USP50Q70EL3 339 aaPredicted RBP17.71■□□□□ 0.42
DDX56-208ENST00000467318 POTECB2RU33 542 aa17.7■□□□□ 0.42
DDX56-208ENST00000467318 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
DDX56-208ENST00000467318 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
DDX56-208ENST00000467318 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
DDX56-208ENST00000467318 GPAA1O43292 621 aa17.69■□□□□ 0.42
DDX56-208ENST00000467318 MBD4O95243 580 aa17.69■□□□□ 0.42
DDX56-208ENST00000467318 GNAT2P19087 354 aa17.69■□□□□ 0.42
DDX56-208ENST00000467318 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
DDX56-208ENST00000467318 USP40Q9NVE5 1235 aa17.69■□□□□ 0.42
DDX56-208ENST00000467318 M0R2C6 588 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 RHBDL3P58872 404 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 NBPF9Q3BBW0 867 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 CDC42EP5Q6NZY7 148 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
DDX56-208ENST00000467318 SGSM2O43147 1006 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 DYNLL1P63167 89 aaKnown RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 LCORLQ8N3X6 602 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 ZC3H15Q8WU90 426 aaKnown RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 ESYT1Q9BSJ8 1104 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 CRNKL1Q9BZJ0 848 aaKnown RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 ARMT1Q9H993 441 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 RRAGCQ9HB90 399 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 CCDC171Q6TFL3 1326 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 HIRAP54198 1017 aaPredicted RBP17.67■□□□□ 0.42
DDX56-208ENST00000467318 FKBP1CQ5VVH2 108 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 TEX11Q8IYF3 940 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 NMRK2Q9NPI5 230 aa17.67■□□□□ 0.42
DDX56-208ENST00000467318 RPAP1Q9BWH6 1393 aaPredicted RBP17.66■□□□□ 0.42
DDX56-208ENST00000467318 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
DDX56-208ENST00000467318 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
DDX56-208ENST00000467318 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
DDX56-208ENST00000467318 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
DDX56-208ENST00000467318 ZNF70Q9UC06 446 aaPredicted RBP17.66■□□□□ 0.42
DDX56-208ENST00000467318 TNFAIP1Q13829 316 aa17.65■□□□□ 0.42
DDX56-208ENST00000467318 NBR1Q14596 966 aa17.65■□□□□ 0.42
DDX56-208ENST00000467318 ATP8A2Q9NTI2 1148 aa17.65■□□□□ 0.42
DDX56-208ENST00000467318 SLC4A4Q9Y6R1 1079 aa17.65■□□□□ 0.42
DDX56-208ENST00000467318 ASTN2O75129 1339 aaPredicted RBP17.65■□□□□ 0.42
DDX56-208ENST00000467318 PITPNM2Q9BZ72 1349 aa17.65■□□□□ 0.42
DDX56-208ENST00000467318 CLRN2A0PK11 232 aa17.64■□□□□ 0.42
DDX56-208ENST00000467318 PATL2C9JE40 543 aaKnown RBP17.64■□□□□ 0.42
DDX56-208ENST00000467318 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.42
DDX56-208ENST00000467318 GIMAP6Q6P9H5 292 aa17.64■□□□□ 0.42
DDX56-208ENST00000467318 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.42
DDX56-208ENST00000467318 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.42
DDX56-208ENST00000467318 IL25Q9H293 177 aa17.64■□□□□ 0.42
DDX56-208ENST00000467318 GPBP1L1Q9HC44 474 aaPredicted RBP17.64■□□□□ 0.42
DDX56-208ENST00000467318 USP5P45974 858 aa17.64■□□□□ 0.41
DDX56-208ENST00000467318 APOBEC3FQ8IUX4 373 aaKnown RBP17.64■□□□□ 0.41
DDX56-208ENST00000467318 TGFBRAP1Q8WUH2 860 aa17.64■□□□□ 0.41
DDX56-208ENST00000467318 NACAP1Q9BZK3 213 aa17.64■□□□□ 0.41
DDX56-208ENST00000467318 PGAP2Q9UHJ9 254 aa17.64■□□□□ 0.41
DDX56-208ENST00000467318 REC8O95072 547 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
DDX56-208ENST00000467318 YY1P25490 414 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 TNNI2P48788 182 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 EAPPQ56P03 285 aaPredicted RBP17.63■□□□□ 0.41
DDX56-208ENST00000467318 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 SDR42E1Q8WUS8 393 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 DSCC1Q9BVC3 393 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 VEZTQ9HBM0 779 aa17.63■□□□□ 0.41
DDX56-208ENST00000467318 SCAF8Q9UPN6 1271 aaKnown RBP17.63■□□□□ 0.41
DDX56-208ENST00000467318 ECM29Q5VYK3 1845 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 GSG1L2A8MUP6 293 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 ENTPD3O75355 529 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 APPP05067 770 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 POTEIP0CG38 1075 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 POTEJP0CG39 1038 aa17.62■□□□□ 0.41
DDX56-208ENST00000467318 ANGEL2Q5VTE6 544 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms