RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PSMD14O00487 310 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 FOXN1O15353 648 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PDE8AO60658 829 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
SND1-205ENST00000467238 CCDC152Q4G0S7 254 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PI4KAP1Q8N8J0 262 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 TBC1D16Q8TBP0 767 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 TRPM4Q8TD43 1214 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 JARID2Q92833 1246 aaPredicted RBP9.05□□□□□ -0.96
SND1-205ENST00000467238 DBNDD1Q9H9R9 158 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PGAP2Q9UHJ9 254 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 CNOT7Q9UIV1 285 aaKnown RBP9.05□□□□□ -0.96
SND1-205ENST00000467238 ABT1Q9ULW3 272 aaKnown RBP9.05□□□□□ -0.96
SND1-205ENST00000467238 MAP3K2Q9Y2U5 619 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 IL16Q14005 1332 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
SND1-205ENST00000467238 RTL9Q8NET4 1388 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 ECE2O60344 883 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 ZEB1P37275 1124 aaPredicted RBP9.04□□□□□ -0.96
SND1-205ENST00000467238 SKOR1P84550 965 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 TWISTNBQ3B726 338 aaPredicted RBP9.04□□□□□ -0.96
SND1-205ENST00000467238 CST9Q5W186 159 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 DPF2Q92785 391 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 GPR101Q96P66 508 aaPredicted RBP9.04□□□□□ -0.96
SND1-205ENST00000467238 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 EYA3Q99504 573 aa9.04□□□□□ -0.96
SND1-205ENST00000467238 H7C1D1 291 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 CTSWP56202 376 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 G2E3Q7L622 706 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 RDH13Q8NBN7 331 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
SND1-205ENST00000467238 STK31Q9BXU1 1019 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
SND1-205ENST00000467238 MRS2Q9HD23 443 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 PRDM10Q9NQV6 1147 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 KCNQ5Q9NR82 932 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 TLL2Q9Y6L7 1015 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 ZNF609O15014 1411 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 FANCIQ9NVI1 1328 aa9.03□□□□□ -0.96
SND1-205ENST00000467238 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 ANP32CO43423 234 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 UFL1O94874 794 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 CELF2O95319 508 aaKnown RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 RPS12P25398 132 aaKnown RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 ECE1P42892 770 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 CTCFP49711 727 aaPredicted RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 MAP2K1Q02750 393 aaPredicted RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 NEXNQ0ZGT2 675 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 CWF19L2Q2TBE0 894 aaKnown RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 CYP4F22Q6NT55 531 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 SAPCD2Q86UD0 394 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 TTLL11Q8NHH1 800 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 CAPNS2Q96L46 248 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 REPIN1Q9BWE0 567 aaKnown RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
SND1-205ENST00000467238 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 ECM29Q5VYK3 1845 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 XDHP47989 1333 aa9.02□□□□□ -0.97
SND1-205ENST00000467238 EGFRP00533 1210 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
SND1-205ENST00000467238 MMP16P51512 607 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 FLIIQ13045 1269 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 TBC1D10BQ4KMP7 808 aaPredicted RBP9.01□□□□□ -0.97
SND1-205ENST00000467238 CDC37L1Q7L3B6 337 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 ANKRD18AQ8IVF6 992 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 KRI1Q8N9T8 703 aaKnown RBP9.01□□□□□ -0.97
SND1-205ENST00000467238 HHIPL1Q96JK4 782 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 CDC5LQ99459 802 aaKnown RBP9.01□□□□□ -0.97
SND1-205ENST00000467238 PLA2G12BQ9BX93 195 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 GREM2Q9H772 168 aa9.01□□□□□ -0.97
SND1-205ENST00000467238 H7C1W4 665 aa9□□□□□ -0.97
SND1-205ENST00000467238 VAMP4O75379 141 aa9□□□□□ -0.97
SND1-205ENST00000467238 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
SND1-205ENST00000467238 GCGRP47871 477 aa9□□□□□ -0.97
SND1-205ENST00000467238 LBX1P52954 281 aa9□□□□□ -0.97
SND1-205ENST00000467238 KCNMA1Q12791 1236 aa9□□□□□ -0.97
SND1-205ENST00000467238 UBE3BQ7Z3V4 1068 aa9□□□□□ -0.97
SND1-205ENST00000467238 WDR63Q8IWG1 891 aa9□□□□□ -0.97
SND1-205ENST00000467238 BSDC1Q9NW68 430 aaPredicted RBP9□□□□□ -0.97
SND1-205ENST00000467238 KIAA0100Q14667 2235 aaKnown RBP9□□□□□ -0.97
SND1-205ENST00000467238 MED23Q9ULK4 1368 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 AOC2O75106 756 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 ALDH1A1P00352 501 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 ATP2B4P23634 1241 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 MAP2K2P36507 400 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 CASP7P55210 303 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 GRM1Q13255 1194 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 FKBP5Q13451 457 aaPredicted RBP8.99□□□□□ -0.97
SND1-205ENST00000467238 GCKRQ14397 625 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 KIF4BQ2VIQ3 1234 aa8.99□□□□□ -0.97
SND1-205ENST00000467238 RSBN1LQ6PCB5 846 aaPredicted RBP8.99□□□□□ -0.97
SND1-205ENST00000467238 DLK2Q6UY11 383 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 818.6 ms