RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 CTNND1O60716 968 aaKnown RBP7.21□□□□□ -1.25
CXXC4-202ENST00000466963 CASP7P55210 303 aa7.21□□□□□ -1.25
CXXC4-202ENST00000466963 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.25
CXXC4-202ENST00000466963 FBXO33Q7Z6M2 555 aa7.21□□□□□ -1.25
CXXC4-202ENST00000466963 HMX1Q9NP08 348 aaPredicted RBP7.21□□□□□ -1.25
CXXC4-202ENST00000466963 GNL3LQ9NVN8 582 aaKnown RBP7.21□□□□□ -1.25
CXXC4-202ENST00000466963 MAST2Q6P0Q8 1798 aa7.21□□□□□ -1.25
CXXC4-202ENST00000466963 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
CXXC4-202ENST00000466963 SPTY2D1Q68D10 685 aaPredicted RBP7.21□□□□□ -1.26
CXXC4-202ENST00000466963 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.21□□□□□ -1.26
CXXC4-202ENST00000466963 UTYO14607 1347 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 PDHXO00330 501 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 MAPK4P31152 587 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 CCDC57Q2TAC2 916 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 MOB2Q70IA6 237 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.21□□□□□ -1.26
CXXC4-202ENST00000466963 FAM43AQ8N2R8 423 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 FAM163AQ96GL9 167 aaPredicted RBP7.21□□□□□ -1.26
CXXC4-202ENST00000466963 IDI2Q9BXS1 227 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 TRIM35Q9UPQ4 493 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 AGTPBP1Q9UPW5 1226 aa7.21□□□□□ -1.26
CXXC4-202ENST00000466963 FANCIQ9NVI1 1328 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 ATP5J2-PTCD1G3V325 749 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 AKNAD1Q5T1N1 836 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 CLMNQ96JQ2 1002 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 PRMT6Q96LA8 375 aaPredicted RBP7.2□□□□□ -1.26
CXXC4-202ENST00000466963 GREM2Q9H772 168 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 VEZTQ9HBM0 779 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 MAP3K2Q9Y2U5 619 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 POTEB2H3BUK9 544 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 MAP3K21Q5TCX8 1036 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 LBHD1Q9BQE6 289 aaPredicted RBP7.2□□□□□ -1.26
CXXC4-202ENST00000466963 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
CXXC4-202ENST00000466963 ATRNL1Q5VV63 1379 aa7.2□□□□□ -1.26
CXXC4-202ENST00000466963 DDX60LQ5H9U9 1706 aaKnown RBP7.2□□□□□ -1.26
CXXC4-202ENST00000466963 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 DEFB123Q8N688 67 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 DNAAF4Q8WXU2 420 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 C1QTNF1Q9BXJ1 281 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 TSPYL2Q9H2G4 693 aaPredicted RBP7.19□□□□□ -1.26
CXXC4-202ENST00000466963 BIN2Q9UBW5 565 aaPredicted RBP7.19□□□□□ -1.26
CXXC4-202ENST00000466963 C19orf81C9J6K1 198 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 IFIT1P09914 478 aaKnown RBP7.19□□□□□ -1.26
CXXC4-202ENST00000466963 COL6A1P12109 1028 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 ATXN2LQ8WWM7 1075 aaKnown RBP7.19□□□□□ -1.26
CXXC4-202ENST00000466963 FBXW7Q969H0 707 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 WRNIP1Q96S55 665 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 MBIPQ9NS73 344 aa7.19□□□□□ -1.26
CXXC4-202ENST00000466963 TNPO2O14787 897 aaKnown RBP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 INHAP05111 366 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 COPB2P35606 906 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 RBM5P52756 815 aaKnown RBP eCLIP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 CERS5Q8N5B7 392 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 CCNA1P78396 465 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 GSTO1P78417 241 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 TAF7LQ5H9L4 462 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 UBE2OQ9C0C9 1292 aaKnown RBP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 SLC5A4Q9NY91 659 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 MYH13Q9UKX3 1938 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 MYCNP04198 464 aaPredicted RBP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 LDHCP07864 332 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 PLA2G5P39877 138 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 PDE3AQ14432 1141 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 AAK1Q2M2I8 961 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 TJAP1Q5JTD0 557 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 WDR63Q8IWG1 891 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 WDR18Q9BV38 432 aa7.18□□□□□ -1.26
CXXC4-202ENST00000466963 HERC5Q9UII4 1024 aaKnown RBP7.18□□□□□ -1.26
CXXC4-202ENST00000466963 MOGSQ13724 837 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 ARRDC4Q8NCT1 418 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 CCER1Q8TC90 406 aaPredicted RBP7.17□□□□□ -1.26
CXXC4-202ENST00000466963 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 RGS2P41220 211 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 RABL6Q3YEC7 729 aaPredicted RBP7.17□□□□□ -1.26
CXXC4-202ENST00000466963 GPAT2Q6NUI2 795 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 LBX2Q6XYB7 198 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 TANGO6Q9C0B7 1094 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 DENND2AQ9ULE3 1009 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 RFX7Q2KHR2 1363 aa7.17□□□□□ -1.26
CXXC4-202ENST00000466963 IRF6O14896 467 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 CIAO1O76071 339 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 PLCG2P16885 1265 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 LDHAL6AQ6ZMR3 332 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 VPS37DQ86XT2 251 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 CNNM1Q9NRU3 951 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 AFG3L2Q9Y4W6 797 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 PTPRFP10586 1907 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 GAKO14976 1311 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 PI4KAP2A4QPH2 592 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 TNFRSF10AO00220 468 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 HOXC6P09630 235 aa7.16□□□□□ -1.26
CXXC4-202ENST00000466963 SLC5A1P13866 664 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms