RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 DOK7Q18PE1 504 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 TMEM92Q6UXU6 159 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
CLDN4-204ENST00000466411 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
CLDN4-204ENST00000466411 AGBL3Q8NEM8 1001 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 NKX2-3Q8TAU0 364 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 CLMNQ96JQ2 1002 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 ARHGAP39Q9C0H5 1083 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 MYOZ2Q9NPC6 264 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
CLDN4-204ENST00000466411 H7C1W4 665 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 EVI5O60447 810 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 TRIM27P14373 513 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 SF3B3Q15393 1217 aaKnown RBP8.65□□□□□ -1.02
CLDN4-204ENST00000466411 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 TDHQ8IZJ6 230 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
CLDN4-204ENST00000466411 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
CLDN4-204ENST00000466411 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 DDX19BQ9UMR2 479 aa8.65□□□□□ -1.02
CLDN4-204ENST00000466411 COL4A1P02462 1669 aa8.65□□□□□ -1.03
CLDN4-204ENST00000466411 F6X3S4 739 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 BCAR3O75815 825 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 CENPBP07199 599 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-204ENST00000466411 UBTFL1P0CB47 393 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-204ENST00000466411 CTGFP29279 349 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 CTSWP56202 376 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 GRAPQ13588 217 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
CLDN4-204ENST00000466411 RSBN1LQ6PCB5 846 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-204ENST00000466411 UBE3BQ7Z3V4 1068 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
CLDN4-204ENST00000466411 SLC10A4Q96EP9 437 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 FAM89AQ96GI7 184 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 CACNA1AO00555 2505 aa8.64□□□□□ -1.03
CLDN4-204ENST00000466411 WNT10BO00744 389 aa8.63□□□□□ -1.03
CLDN4-204ENST00000466411 FARP2O94887 1054 aaPredicted RBP8.63□□□□□ -1.03
CLDN4-204ENST00000466411 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
CLDN4-204ENST00000466411 CCL5P13501 91 aa8.63□□□□□ -1.03
CLDN4-204ENST00000466411 PRKG1Q13976 671 aa8.63□□□□□ -1.03
CLDN4-204ENST00000466411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLDN4-204ENST00000466411 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
CLDN4-204ENST00000466411 UNCXA6NJT0 531 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 SGPL1O95470 568 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 NF2P35240 595 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 MAGEA10P43363 369 aaPredicted RBP8.62□□□□□ -1.03
CLDN4-204ENST00000466411 ARHGEF6Q15052 776 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 OTUD7BQ6GQQ9 843 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 ITPRIPQ8IWB1 547 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 PLPP6Q8IY26 295 aa8.62□□□□□ -1.03
CLDN4-204ENST00000466411 U2AF1L4Q8WU68 220 aaKnown RBP8.62□□□□□ -1.03
CLDN4-204ENST00000466411 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 ANKRD18BA2A2Z9 1011 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 GNRH1P01148 92 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 GNAI2P04899 355 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 HCLS1P14317 486 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 IGHMBP2P38935 993 aaKnown RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 CASP7P55210 303 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 PRMT2P55345 433 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 RRP1P56182 461 aaKnown RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 GPSM2P81274 684 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 MVPQ14764 893 aaKnown RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 CCDC57Q2TAC2 916 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 TBC1D16Q8TBP0 767 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 BRI3BPQ8WY22 251 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 ZBED3Q96IU2 234 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 USP44Q9H0E7 712 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 NSFL1CQ9UNZ2 370 aaKnown RBP8.61□□□□□ -1.03
CLDN4-204ENST00000466411 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
CLDN4-204ENST00000466411 MUC6Q6W4X9 2439 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 DPYSL4O14531 572 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 CSF1RP07333 972 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 RABL6Q3YEC7 729 aaPredicted RBP8.6□□□□□ -1.03
CLDN4-204ENST00000466411 TAF7LQ5H9L4 462 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 ANKRD18AQ8IVF6 992 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 TTLL11Q8NHH1 800 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 FAM161BQ96MY7 647 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 MPHOSPH8Q99549 860 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 RNF208Q9H0X6 261 aa8.6□□□□□ -1.03
CLDN4-204ENST00000466411 ZMYND8Q9ULU4 1186 aaPredicted RBP8.6□□□□□ -1.03
CLDN4-204ENST00000466411 BDP1A6H8Y1 2624 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 TLR2O60603 784 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 HMMRO75330 724 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 GRK4P32298 578 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 RPS8P62241 208 aaKnown RBP8.59□□□□□ -1.03
CLDN4-204ENST00000466411 MTX1Q13505 466 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 CELF1Q92879 486 aaKnown RBP8.59□□□□□ -1.03
CLDN4-204ENST00000466411 CLUAP1Q96AJ1 413 aa8.59□□□□□ -1.03
CLDN4-204ENST00000466411 ANKRD2Q9GZV1 360 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms