RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 GPR108Q9NPR9 543 aa11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 DBNLQ9UJU6 430 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 SUPT16HQ9Y5B9 1047 aaKnown RBP11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 SSC5DA1L4H1 1573 aa11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
RTFDC1-205ENST00000466260 SALL1Q9NSC2 1324 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 UQCRFS1P1P0C7P4 283 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 ZNF157P51786 506 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 ERICH6Q7L0X2 663 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 CDAN1Q8IWY9 1227 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 SUGT1Q9Y2Z0 365 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 DAGLAQ9Y4D2 1042 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 NDUFB9Q9Y6M9 179 aa11.94□□□□□ -0.5
RTFDC1-205ENST00000466260 TNNI2P48788 182 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 HDLBPQ00341 1268 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 TCP10Q12799 353 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 TNFAIP1Q13829 316 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 RGMBQ6NW40 437 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 KIF1BPQ96EK5 621 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 MYH7P12883 1935 aa11.93□□□□□ -0.5
RTFDC1-205ENST00000466260 SMARCA5O60264 1052 aaPredicted RBP11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 ZAP70P43403 619 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 MECOMQ03112 1051 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 APOBEC3HQ6NTF7 200 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 HHIPL2Q6UWX4 724 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 ARMC9Q7Z3E5 817 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 ZIC5Q96T25 663 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 PPP2R3BQ9Y5P8 575 aa11.92□□□□□ -0.5
RTFDC1-205ENST00000466260 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 IFIT2P09913 472 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 BTDP43251 543 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 CHRDL2Q6WN34 429 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 RASAL3Q86YV0 1011 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
RTFDC1-205ENST00000466260 FOCADQ5VW36 1801 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 FOXN1O15353 648 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 CYP2E1P05181 493 aaPredicted RBP11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 FKBP1BP68106 108 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 NFIAQ12857 509 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 PICALMQ13492 652 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 CDC42EP5Q6NZY7 148 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
RTFDC1-205ENST00000466260 FAM155AB1AL88 458 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 SLC10A3P09131 477 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 SUPT20HL1Q3ZLR7 823 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 ZNF384Q8TF68 577 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 NSUN4Q96CB9 384 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 MRIQ9BWK5 157 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 ANTXR1Q9H6X2 564 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 PIH1D3Q9NQM4 214 aaKnown RBP11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 MYH1P12882 1939 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
RTFDC1-205ENST00000466260 GAKO14976 1311 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 ATAD5Q96QE3 1844 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 GSTO1P78417 241 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 MAP2K1Q02750 393 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 NOGQ13253 232 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 NAA16Q6N069 864 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 ZSCAN29Q8IWY8 852 aaPredicted RBP11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 NOL10Q9BSC4 688 aaKnown RBP11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 AATFQ9NY61 560 aaKnown RBP eCLIP11.88□□□□□ -0.51
RTFDC1-205ENST00000466260 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 LDHCP07864 332 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 IREB2P48200 963 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 RGS3P49796 1198 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 EDC3Q96F86 508 aaKnown RBP11.87□□□□□ -0.51
RTFDC1-205ENST00000466260 ZNF512BQ96KM6 892 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms