RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 STRBPQ96SI9 672 aaKnown RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 PDCL3Q9H2J4 239 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 UQCRFS1P1P0C7P4 283 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 GTF2E1P29083 439 aaPredicted RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 IGHMBP2P38935 993 aaKnown RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 DDB1Q16531 1140 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 IFNL3Q8IZI9 196 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 CCDC24Q8N4L8 307 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 KCNG4Q8TDN1 519 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 ZSWIM5Q9P217 1185 aa18.98■□□□□ 0.63
SLX4-202ENST00000466154 SLC3A2P08195 630 aaKnown RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 FMR1NBQ8N0W7 255 aaPredicted RBP18.98■□□□□ 0.63
SLX4-202ENST00000466154 SH2B2O14492 632 aaPredicted RBP18.97■□□□□ 0.63
SLX4-202ENST00000466154 ZNF202O95125 648 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 EPB41L4AQ9HCS5 686 aaPredicted RBP18.97■□□□□ 0.63
SLX4-202ENST00000466154 RIOK3O14730 519 aaKnown RBP18.97■□□□□ 0.63
SLX4-202ENST00000466154 IL6STP40189 918 aaPredicted RBP18.97■□□□□ 0.63
SLX4-202ENST00000466154 UBE3CQ15386 1083 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 RAI14Q9P0K7 980 aa18.97■□□□□ 0.63
SLX4-202ENST00000466154 SLC4A8Q2Y0W8 1093 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 MFSD6Q6ZSS7 791 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 SPTLC3Q9NUV7 552 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 KCNJ14Q9UNX9 436 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 PFKFB1P16118 471 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 PTPN21Q16825 1174 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 DHX40Q8IX18 779 aaKnown RBP18.96■□□□□ 0.63
SLX4-202ENST00000466154 NAT10Q9H0A0 1025 aaKnown RBP18.96■□□□□ 0.63
SLX4-202ENST00000466154 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 ZMYM6O95789 1325 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 SMIM22K7EJ46 135 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 WDHD1O75717 1129 aaPredicted RBP18.96■□□□□ 0.63
SLX4-202ENST00000466154 BCL9O00512 1426 aa18.96■□□□□ 0.63
SLX4-202ENST00000466154 hCG_1642624A0A1W2PR95 340 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 MROH5Q6ZUA9 1318 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 GYG1P46976 350 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 ATL3Q6DD88 541 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 BRAPQ7Z569 592 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 PATL2C9JE40 543 aaKnown RBP18.95■□□□□ 0.62
SLX4-202ENST00000466154 CDKL5O76039 1030 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 TNNT1P13805 278 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
SLX4-202ENST00000466154 ZNF34Q8IZ26 560 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 PRIMPOLQ96LW4 560 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 KIAA1468Q9P260 1216 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 JAG2Q9Y219 1238 aa18.95■□□□□ 0.62
SLX4-202ENST00000466154 UBR2Q8IWV8 1755 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 EVCP57679 992 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 CCDC152Q4G0S7 254 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 LOC102724428A0A0B4J2F2 783 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 KCNQ2O43526 872 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 CYP7A1P22680 504 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 ARID4AP29374 1257 aaPredicted RBP18.94■□□□□ 0.62
SLX4-202ENST00000466154 GUCY1A2P33402 732 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 SYKP43405 635 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 SIK1P57059 783 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 POLR3EQ9NVU0 708 aa18.94■□□□□ 0.62
SLX4-202ENST00000466154 MROH7-TTC4A0A0A0MT08 1334 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 ERICH2A1L162 156 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 RANBP6O60518 1105 aaKnown RBP18.93■□□□□ 0.62
SLX4-202ENST00000466154 PRDM1O75626 825 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 SKILP12757 684 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 SSRP1Q08945 709 aaKnown RBP18.93■□□□□ 0.62
SLX4-202ENST00000466154 LY9Q9HBG7 655 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 TCRBV5S4A2TA0A5A2 114 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 CHRNDQ07001 517 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 NACAP1Q9BZK3 213 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 IFNKQ9P0W0 207 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 XIRP1Q702N8 1843 aaKnown RBP18.93■□□□□ 0.62
SLX4-202ENST00000466154 ERVV-1B6SEH8 477 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 YEATS4O95619 227 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 IGDCC4Q8TDY8 1250 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 TACC3Q9Y6A5 838 aa18.93■□□□□ 0.62
SLX4-202ENST00000466154 PNOCQ13519 176 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 ITPK1Q13572 414 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 INTS5Q6P9B9 1019 aaKnown RBP18.92■□□□□ 0.62
SLX4-202ENST00000466154 USP27XA6NNY8 438 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 BTBD18B2RXH4 712 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
SLX4-202ENST00000466154 AKNAD1Q5T1N1 836 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 PDILTQ8N807 584 aa18.92■□□□□ 0.62
SLX4-202ENST00000466154 CYP2D7A0A087X1C5 515 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 KDM4FA0A1W2PPD8 638 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 GSG1L2A8MUP6 293 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 CAVIN2O95810 425 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 WTAPQ15007 396 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 TMC6Q7Z403 805 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 LRRC8AQ8IWT6 810 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 NPHP1O15259 732 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 FGFR2P21802 821 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 SART3Q15020 963 aaKnown RBP18.91■□□□□ 0.62
SLX4-202ENST00000466154 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.91■□□□□ 0.62
SLX4-202ENST00000466154 TMEM87BQ96K49 555 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 UBAC1Q9BSL1 405 aa18.91■□□□□ 0.62
SLX4-202ENST00000466154 A0A1W2PQ27 194 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms