RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 ZEB2O60315 1214 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 ZNF165P49910 485 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 ZBED6P86452 979 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 TMED1Q13445 227 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 TSR2Q969E8 191 aaKnown RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 UBA5Q9GZZ9 404 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 CWC25Q9NXE8 425 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 MRFAP1Q9Y605 127 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 DCCP43146 1447 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 MEFVO15553 781 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 SMNDC1O75940 238 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 URI1O94763 535 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 FERP16591 822 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 NAT1P18440 290 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 PPP2R3AQ06190 1150 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 DBN1Q16643 649 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 KIF4BQ2VIQ3 1234 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 GORABQ5T7V8 394 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 MFSD4BQ5TF39 518 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 SPTY2D1Q68D10 685 aaPredicted RBP10.79□□□□□ -0.68
CDHR3-203ENST00000466045 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 EPC1Q9H2F5 836 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 RTEL1Q9NZ71 1219 aa10.79□□□□□ -0.68
CDHR3-203ENST00000466045 SYNRGQ9UMZ2 1314 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 ENO4A6NNW6 628 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 FANCGO15287 622 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 DRP2Q13474 957 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 SNCBQ16143 134 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 TTC22Q5TAA0 569 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 THEMIS2Q5TEJ8 643 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 ITPRIPQ8IWB1 547 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 MIPOL1Q8TD10 442 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 GBP3Q9H0R5 595 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 MMADHCQ9H3L0 296 aaPredicted RBP10.78□□□□□ -0.68
CDHR3-203ENST00000466045 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 CDHR2Q9BYE9 1310 aa10.78□□□□□ -0.68
CDHR3-203ENST00000466045 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
CDHR3-203ENST00000466045 CDK12Q9NYV4 1490 aaPredicted RBP10.78□□□□□ -0.68
CDHR3-203ENST00000466045 SHTN1A0MZ66 631 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.68
CDHR3-203ENST00000466045 F13A1P00488 732 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 PAPOLAP51003 745 aaKnown RBP10.77□□□□□ -0.68
CDHR3-203ENST00000466045 NEK4P51957 841 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 CCDC40Q4G0X9 1142 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.68
CDHR3-203ENST00000466045 DTNBP1Q96EV8 351 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.68
CDHR3-203ENST00000466045 SYNPO2Q9UMS6 1093 aa10.77□□□□□ -0.68
CDHR3-203ENST00000466045 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 A6NNZ2 444 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 RNF40O75150 1001 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 SASH1O94885 1247 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 RANBP1P43487 201 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 CASP8Q14790 479 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 TUBB8Q3ZCM7 444 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 FCHSD1Q86WN1 690 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 RBM41Q96IZ5 413 aaKnown RBP10.77□□□□□ -0.69
CDHR3-203ENST00000466045 GGA2Q9UJY4 613 aa10.77□□□□□ -0.69
CDHR3-203ENST00000466045 ZNF24P17028 368 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-203ENST00000466045 IRAK1P51617 712 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-203ENST00000466045 CCDC15Q0P6D6 951 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FAM228AQ86W67 206 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 DLG5Q8TDM6 1919 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 RNF8O76064 485 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 KIAA0754O94854 1291 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-203ENST00000466045 HOMER1Q86YM7 354 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 PLEKHM2Q8IWE5 1019 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FMNL2Q96PY5 1086 aa10.76□□□□□ -0.69
CDHR3-203ENST00000466045 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
CDHR3-203ENST00000466045 FIBPO43427 364 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 IFFO1Q0D2I5 559 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 USP4Q13107 963 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 DCTN1Q14203 1278 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 SFMBT2Q5VUG0 894 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 ILDR1Q86SU0 546 aaPredicted RBP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 NUP133Q8WUM0 1156 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 SNRNP27Q8WVK2 155 aaKnown RBP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 ACSBG1Q96GR2 724 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 ANKZF1Q9H8Y5 726 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 EIF3HO15372 352 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 SYF2O95926 243 aaKnown RBP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 GNL2Q13823 731 aaKnown RBP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 NFE2L2Q16236 605 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 TSNAXIP1Q2TAA8 658 aa10.75□□□□□ -0.69
CDHR3-203ENST00000466045 BZW1Q7L1Q6 419 aaKnown RBP10.75□□□□□ -0.69
CDHR3-203ENST00000466045 APLFQ8IW19 511 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms