RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 SMIM5Q71RC9 77 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 FAM129BQ96TA1 746 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 TGIF2Q9GZN2 237 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 PIM2Q9P1W9 311 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 ZBTB1Q9Y2K1 713 aa8.39□□□□□ -1.07
TPM3-214ENST00000466010 POLRMTO00411 1230 aaKnown RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 ZBTB24O43167 697 aaPredicted RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 FZD6O60353 706 aa8.38□□□□□ -1.07
TPM3-214ENST00000466010 VARSP26640 1264 aaKnown RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 ALG1LQ6GMV1 187 aa8.38□□□□□ -1.07
TPM3-214ENST00000466010 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
TPM3-214ENST00000466010 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
TPM3-214ENST00000466010 SRP68Q9UHB9 627 aaKnown RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 ZNF652Q9Y2D9 606 aa8.38□□□□□ -1.07
TPM3-214ENST00000466010 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
TPM3-214ENST00000466010 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
TPM3-214ENST00000466010 ZNF76P36508 570 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 USP5P45974 858 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 EPHA4P54764 986 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
TPM3-214ENST00000466010 DDR1Q08345 913 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 RAD51AP2Q09MP3 1159 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 NFE2L2Q16236 605 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 DALRD3Q5D0E6 543 aaKnown RBP8.37□□□□□ -1.07
TPM3-214ENST00000466010 CLEC4GQ6UXB4 293 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 THSD4Q6ZMP0 1018 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 MCM10Q7L590 875 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 FAM161BQ96MY7 647 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 BABAM1Q9NWV8 329 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 BCS1LQ9Y276 419 aa8.37□□□□□ -1.07
TPM3-214ENST00000466010 VIRMAQ69YN4 1812 aaKnown RBP8.37□□□□□ -1.07
TPM3-214ENST00000466010 ADCY9O60503 1353 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 A0A0G2JLW4 131 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 GPR182O15218 404 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 DPEP1P16444 411 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 BRD2P25440 801 aaKnown RBP8.36□□□□□ -1.07
TPM3-214ENST00000466010 PDE6BP35913 854 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 NFIXQ14938 502 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
TPM3-214ENST00000466010 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 PLEKHF1Q96S99 279 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 SETDB2Q96T68 719 aa8.36□□□□□ -1.07
TPM3-214ENST00000466010 C2orf49Q9BVC5 232 aaPredicted RBP8.36□□□□□ -1.07
TPM3-214ENST00000466010 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 H0YIN7 160 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 NPHP1O15259 732 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 S1PR4O95977 384 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 GNRH1P01148 92 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 SERPINB2P05120 415 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 ATP2B1P20020 1258 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 FANCCQ00597 558 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 DDX10Q13206 875 aaKnown RBP8.35□□□□□ -1.07
TPM3-214ENST00000466010 COX20Q5RI15 118 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 LDLRAD1Q5T700 205 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 SLC9A9Q8IVB4 645 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 OTUD5Q96G74 571 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 MYO19Q96H55 970 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 TINF2Q9BSI4 451 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 ETNK1Q9HBU6 452 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 CAPN10Q9HC96 672 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 CYLDQ9NQC7 956 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 SCHIP1Q9P0W5 487 aaPredicted RBP8.35□□□□□ -1.07
TPM3-214ENST00000466010 ATP10DQ9P241 1426 aa8.35□□□□□ -1.07
TPM3-214ENST00000466010 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 A6NJY4 79 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 TNFRSF10BO14763 440 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 KCNA3P22001 575 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 C1QTNF8P60827 252 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 ST5P78524 1137 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 WDR43Q15061 677 aaKnown RBP eCLIP8.34□□□□□ -1.07
TPM3-214ENST00000466010 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 DPH6Q7L8W6 267 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 CNBD1Q8NA66 436 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 FBF1Q8TES7 1133 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 ARMC5Q96C12 935 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 PRKAG2Q9UGJ0 569 aa8.34□□□□□ -1.07
TPM3-214ENST00000466010 SCN7AQ01118 1682 aa8.34□□□□□ -1.08
TPM3-214ENST00000466010 A1BGP04217 495 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 PCSK2P16519 638 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 GNA15P30679 374 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 WNT7BP56706 349 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
TPM3-214ENST00000466010 SOGA3Q5TF21 947 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 NBPF15Q8N660 670 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 TTLL6Q8N841 843 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 NIF3L1Q9GZT8 377 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 KIAA1551Q9HCM1 1747 aa8.33□□□□□ -1.08
TPM3-214ENST00000466010 CUEDC1Q9NWM3 386 aaPredicted RBP8.33□□□□□ -1.08
TPM3-214ENST00000466010 NRXN2Q9P2S2 1712 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms