RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 IL1RAPL2Q9NP60 686 aa16.33■□□□□ 0.2
LIMK2-207ENST00000465937 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
LIMK2-207ENST00000465937 RPAP1Q9BWH6 1393 aaPredicted RBP16.33■□□□□ 0.2
LIMK2-207ENST00000465937 USP2O75604 605 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-207ENST00000465937 TNNI2P48788 182 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 CACNB3P54284 484 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-207ENST00000465937 ARMC9Q7Z3E5 817 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
LIMK2-207ENST00000465937 IDI2Q9BXS1 227 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 TMEM39BQ9GZU3 492 aa16.32■□□□□ 0.2
LIMK2-207ENST00000465937 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
LIMK2-207ENST00000465937 MROH7-TTC4A0A0A0MT08 1334 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 ZAP70P43403 619 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
LIMK2-207ENST00000465937 RHBDL3P58872 404 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 DZIP1Q86YF9 867 aaKnown RBP16.31■□□□□ 0.2
LIMK2-207ENST00000465937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
LIMK2-207ENST00000465937 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
LIMK2-207ENST00000465937 PPP1R12BO60237 982 aaPredicted RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 NFIAQ12857 509 aa16.3■□□□□ 0.2
LIMK2-207ENST00000465937 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
LIMK2-207ENST00000465937 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 USP40Q9NVE5 1235 aa16.3■□□□□ 0.2
LIMK2-207ENST00000465937 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
LIMK2-207ENST00000465937 ANGEL1Q9UNK9 670 aaKnown RBP16.3■□□□□ 0.2
LIMK2-207ENST00000465937 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
LIMK2-207ENST00000465937 FOXN1O15353 648 aa16.29■□□□□ 0.2
LIMK2-207ENST00000465937 WDHD1O75717 1129 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-207ENST00000465937 LDHCP07864 332 aa16.29■□□□□ 0.2
LIMK2-207ENST00000465937 GSTO1P78417 241 aa16.29■□□□□ 0.2
LIMK2-207ENST00000465937 LAMB1P07942 1786 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 ENTPD3O75355 529 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 BTDP43251 543 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 PPP4CP60510 307 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 KIF23Q02241 960 aaPredicted RBP16.28■□□□□ 0.2
LIMK2-207ENST00000465937 AAMPQ13685 434 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 LRRCC1Q9C099 1032 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 LRP2BPQ9P2M1 347 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 DOCK2Q92608 1830 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
LIMK2-207ENST00000465937 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 GRM1Q13255 1194 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 PRKG1Q13976 671 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 TTLL12Q14166 644 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-207ENST00000465937 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-207ENST00000465937 ZFPM1Q8IX07 1006 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
LIMK2-207ENST00000465937 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.27■□□□□ 0.2
LIMK2-207ENST00000465937 CSRNP1Q96S65 589 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 RAI14Q9P0K7 980 aa16.27■□□□□ 0.2
LIMK2-207ENST00000465937 OTOFQ9HC10 1997 aa16.27■□□□□ 0.19
LIMK2-207ENST00000465937 APBB1O00213 710 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
LIMK2-207ENST00000465937 IREB2P48200 963 aaKnown RBP16.26■□□□□ 0.19
LIMK2-207ENST00000465937 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.26■□□□□ 0.19
LIMK2-207ENST00000465937 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 ANKRD13AQ8IZ07 590 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 CLMNQ96JQ2 1002 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 ANTXR1Q9H6X2 564 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
LIMK2-207ENST00000465937 ZNF112Q9UJU3 913 aa16.26■□□□□ 0.19
LIMK2-207ENST00000465937 CA12O43570 354 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 HSPA8P11142 646 aaKnown RBP16.25■□□□□ 0.19
LIMK2-207ENST00000465937 ATP5JP18859 108 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 TM4SF4P48230 202 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 CTCFP49711 727 aaPredicted RBP16.25■□□□□ 0.19
LIMK2-207ENST00000465937 RGS3P49796 1198 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 MAP3K9P80192 1104 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
LIMK2-207ENST00000465937 NAA16Q6N069 864 aaPredicted RBP16.25■□□□□ 0.19
LIMK2-207ENST00000465937 ADGRA1Q86SQ6 560 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
LIMK2-207ENST00000465937 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
LIMK2-207ENST00000465937 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
LIMK2-207ENST00000465937 TCP10Q12799 353 aa16.24■□□□□ 0.19
LIMK2-207ENST00000465937 SLC10A4Q96EP9 437 aa16.24■□□□□ 0.19
LIMK2-207ENST00000465937 ZBTB48P10074 688 aaPredicted RBP16.23■□□□□ 0.19
LIMK2-207ENST00000465937 GJA5P36382 358 aa16.23■□□□□ 0.19
LIMK2-207ENST00000465937 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
LIMK2-207ENST00000465937 WNK4Q96J92 1243 aa16.23■□□□□ 0.19
LIMK2-207ENST00000465937 HAUS7Q99871 368 aa16.23■□□□□ 0.19
LIMK2-207ENST00000465937 SAGE1Q9NXZ1 904 aa16.23■□□□□ 0.19
LIMK2-207ENST00000465937 CDK5RAP2Q96SN8 1893 aa16.22■□□□□ 0.19
LIMK2-207ENST00000465937 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
LIMK2-207ENST00000465937 TTF1Q15361 905 aaPredicted RBP16.22■□□□□ 0.19
LIMK2-207ENST00000465937 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
LIMK2-207ENST00000465937 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
LIMK2-207ENST00000465937 FOCADQ5VW36 1801 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms