RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 NEO1Q92859 1461 aa6.52□□□□□ -1.37
CDK13-203ENST00000465643 ARAP3Q8WWN8 1544 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 CCDC85CA6NKD9 419 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 KLF4O43474 513 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 F13A1P00488 732 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 HOXD8P13378 290 aaPredicted RBP6.51□□□□□ -1.37
CDK13-203ENST00000465643 HNRNPMP52272 730 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDK13-203ENST00000465643 LMNB2Q03252 620 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 FAM169BQ8N8A8 192 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
CDK13-203ENST00000465643 CEP44Q9C0F1 390 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 ADGRL1O94910 1474 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 FGD6Q6ZV73 1430 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 MIA2Q96PC5 1412 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 NRLP54845 237 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 TRIM22Q8IYM9 498 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 STK35Q8TDR2 534 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 NKD1Q969G9 470 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
CDK13-203ENST00000465643 SCAPERQ9BY12 1400 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 CAMSAP2Q08AD1 1489 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 RLBP1P12271 317 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 SEPT6Q14141 434 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 FAM196AQ6ZSG2 479 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 TRPM4Q8TD43 1214 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 SHDQ96IW2 340 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 AAASQ9NRG9 546 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 SAMD9LQ8IVG5 1584 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 PLEKHH2Q8IVE3 1493 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 FAM221BA6H8Z2 402 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 H7C1W4 665 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 FGFR3P22607 806 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 GPLD1P80108 840 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 SRPK1Q96SB4 655 aaKnown RBP6.5□□□□□ -1.37
CDK13-203ENST00000465643 DNAJB12Q9NXW2 375 aaKnown RBP6.5□□□□□ -1.37
CDK13-203ENST00000465643 PTPN23Q9H3S7 1636 aa6.5□□□□□ -1.37
CDK13-203ENST00000465643 DENND4BO75064 1496 aaPredicted RBP6.49□□□□□ -1.37
CDK13-203ENST00000465643 RAPGEF3O95398 923 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
CDK13-203ENST00000465643 RAB33AQ14088 237 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 CEP135Q66GS9 1140 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 MPRIPQ6WCQ1 1025 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 TRIM42Q8IWZ5 723 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 MRFAP1L1Q96HT8 127 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 SRRTQ9BXP5 876 aaKnown RBP6.49□□□□□ -1.37
CDK13-203ENST00000465643 TRIM55Q9BYV6 548 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 KDM6BO15054 1643 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 SYCP2Q9BX26 1530 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 SMAD7O15105 426 aaKnown RBP6.49□□□□□ -1.37
CDK13-203ENST00000465643 BMP6P22004 513 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 CRIPAKQ8N1N5 446 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 KANSL2Q9H9L4 492 aa6.49□□□□□ -1.37
CDK13-203ENST00000465643 ATXN7L1Q9ULK2 861 aaPredicted RBP6.49□□□□□ -1.37
CDK13-203ENST00000465643 ABCC1P33527 1531 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 C2CD2LO14523 706 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 GFRA3O60609 400 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 DGAT1O75907 488 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 CPB1P15086 417 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 ITGA6P23229 1130 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 MCM4P33991 863 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 PCBP4P57723 403 aaKnown RBP6.48□□□□□ -1.37
CDK13-203ENST00000465643 NFE2L2Q16236 605 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 SYT9Q86SS6 491 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 AFAP1Q8N556 730 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 UBE2OQ9C0C9 1292 aaKnown RBP6.48□□□□□ -1.37
CDK13-203ENST00000465643 TMEM39AQ9NV64 488 aa6.48□□□□□ -1.37
CDK13-203ENST00000465643 FAM221AA4D161 298 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
CDK13-203ENST00000465643 FBXW10Q5XX13 1052 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 LACRTQ9GZZ8 138 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 SNTG2Q9NY99 539 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 PRKAG3Q9UGI9 489 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 TCOF1Q13428 1488 aaKnown RBP6.47□□□□□ -1.37
CDK13-203ENST00000465643 ARHGEF12Q9NZN5 1544 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 KIAA1107Q9UPP5 1409 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 TRAPPC8Q9Y2L5 1435 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 TSPY4P0CV99 314 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 TSPY10P0CW01 314 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 RASA3Q14644 834 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 NBPF6Q5VWK0 638 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 VN1R5Q7Z5H4 357 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 GPATCH3Q96I76 525 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 NBPF4Q96M43 638 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 CLEC4MQ9H2X3 399 aaPredicted RBP6.47□□□□□ -1.37
CDK13-203ENST00000465643 ST7Q9NRC1 585 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 PRR12Q9ULL5 1215 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 TRIM33Q9UPN9 1127 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 SPAG9O60271 1321 aaKnown RBP6.47□□□□□ -1.37
CDK13-203ENST00000465643 POGZQ7Z3K3 1410 aa6.47□□□□□ -1.37
CDK13-203ENST00000465643 COL17A1Q9UMD9 1497 aaPredicted RBP6.46□□□□□ -1.37
CDK13-203ENST00000465643 GHRHP01286 108 aa6.46□□□□□ -1.37
CDK13-203ENST00000465643 RPS26P62854 115 aaKnown RBP6.46□□□□□ -1.37
CDK13-203ENST00000465643 GATAD2BQ8WXI9 593 aa6.46□□□□□ -1.37
CDK13-203ENST00000465643 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms