RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 MYH13Q9UKX3 1938 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 CHGBP05060 677 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 UQCRFS1P1P0C7P4 283 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 ECE1P42892 770 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 ZAP70P43403 619 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 BCAMP50895 628 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 GPSM2P81274 684 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 EAPPQ56P03 285 aaPredicted RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 TTC39AQ5SRH9 613 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 MAP1SQ66K74 1059 aaPredicted RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 TXNRD3Q86VQ6 643 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 C7orf43Q8WVR3 580 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 MASTLQ96GX5 879 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 XDHP47989 1333 aa10.67□□□□□ -0.7
UBA3-208ENST00000465627 PDS5AQ29RF7 1337 aaKnown RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 ZNF646O15015 1829 aaPredicted RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 RANBP2P49792 3224 aaKnown RBP10.67□□□□□ -0.7
UBA3-208ENST00000465627 A0A0D9SFI3 127 aa10.66□□□□□ -0.7
UBA3-208ENST00000465627 GOLIM4O00461 696 aa10.66□□□□□ -0.7
UBA3-208ENST00000465627 CA12O43570 354 aa10.66□□□□□ -0.7
UBA3-208ENST00000465627 VARS2Q5ST30 1063 aaKnown RBP10.66□□□□□ -0.7
UBA3-208ENST00000465627 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
UBA3-208ENST00000465627 LSG1Q9H089 658 aaKnown RBP10.66□□□□□ -0.7
UBA3-208ENST00000465627 HIP1O00291 1037 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
UBA3-208ENST00000465627 ALDH1B1P30837 517 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 MAP2K2P36507 400 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 GYG1P46976 350 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 NMIQ13287 307 aaPredicted RBP10.65□□□□□ -0.7
UBA3-208ENST00000465627 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 C2CD5Q86YS7 1000 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
UBA3-208ENST00000465627 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 PIH1D3Q9NQM4 214 aaKnown RBP10.65□□□□□ -0.7
UBA3-208ENST00000465627 HPS5Q9UPZ3 1129 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 RAD50Q92878 1312 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 CACNA1AO00555 2505 aa10.65□□□□□ -0.7
UBA3-208ENST00000465627 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 SEMA3EO15041 775 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.71
UBA3-208ENST00000465627 ATP2B4P23634 1241 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 CASC1Q6TDU7 716 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 SPATA5Q8NB90 893 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 TBC1D16Q8TBP0 767 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 FSD1Q9BTV5 496 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 POLLQ9UGP5 575 aa10.65□□□□□ -0.71
UBA3-208ENST00000465627 MAST2Q6P0Q8 1798 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 H0YIN7 160 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 REC8O95072 547 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 CWC27Q6UX04 472 aaKnown RBP10.64□□□□□ -0.71
UBA3-208ENST00000465627 OLFM4Q6UX06 510 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 ZNF589Q86UQ0 364 aaPredicted RBP10.64□□□□□ -0.71
UBA3-208ENST00000465627 TDRD7Q8NHU6 1098 aaKnown RBP10.64□□□□□ -0.71
UBA3-208ENST00000465627 KCNB2Q92953 911 aa10.64□□□□□ -0.71
UBA3-208ENST00000465627 BRCA2P51587 3418 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 FOXP2O15409 715 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
UBA3-208ENST00000465627 HIBADHP31937 336 aaKnown RBP10.63□□□□□ -0.71
UBA3-208ENST00000465627 ADD2P35612 726 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
UBA3-208ENST00000465627 PTH1RQ03431 593 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 PRPF40BQ6NWY9 871 aaKnown RBP10.63□□□□□ -0.71
UBA3-208ENST00000465627 ZNF384Q8TF68 577 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
UBA3-208ENST00000465627 RTFDC1Q9BY42 306 aaPredicted RBP10.63□□□□□ -0.71
UBA3-208ENST00000465627 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 RAPGEFL1Q9UHV5 662 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 GGA1Q9UJY5 639 aa10.63□□□□□ -0.71
UBA3-208ENST00000465627 FER1L6Q2WGJ9 1857 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 VCANP13611 3396 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 MAST3O60307 1309 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 CCDC171Q6TFL3 1326 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 SALL1Q9NSC2 1324 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 UFL1O94874 794 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
UBA3-208ENST00000465627 IL1R1P14778 569 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 TTF1Q15361 905 aaPredicted RBP10.62□□□□□ -0.71
UBA3-208ENST00000465627 UBE3CQ15386 1083 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 CAVIN4Q5BKX8 364 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 RUFY2Q8WXA3 655 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 MAP4K1Q92918 833 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 OSBP2Q969R2 916 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 UPF2Q9HAU5 1272 aaKnown RBP10.62□□□□□ -0.71
UBA3-208ENST00000465627 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
UBA3-208ENST00000465627 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
UBA3-208ENST00000465627 HSPA4P34932 840 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms