RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ALG1Q9BT22 464 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 UBXN6Q9BZV1 441 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 LCMT1Q9UIC8 334 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 INCENPQ9NQS7 918 aa14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 FEZ2Q9UHY8 353 aaPredicted RBP14.49□□□□□ -0.09
CLCNKA-204ENST00000464764 H3BQF6 201 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 GRIN1Q05586 938 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 IMMTQ16891 758 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 GRAMD1CQ8IYS0 662 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 MYL10Q9BUA6 226 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 NLRP2Q9NX02 1062 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 HPSEQ9Y251 543 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 ZSCAN12O43309 604 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 PTPAQ15257 358 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 KRT40Q6A162 431 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 TTLL7Q6ZT98 887 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 TC2NQ8N9U0 490 aa14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 SRRTQ9BXP5 876 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-204ENST00000464764 ARHGAP6O43182 974 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 CCP110O43303 1012 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 OLFM4Q6UX06 510 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 FUT8Q9BYC5 575 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 MRPL44Q9H9J2 332 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 MRFAP1Q9Y605 127 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 TRIM66O15016 1216 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 DHX16O60231 1041 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 TUBB4AP04350 444 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 KIFC2Q96AC6 838 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 LZTFL1Q9NQ48 299 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 PUF60Q9UHX1 559 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 RSRC2Q7L4I2 434 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 RALYLQ86SE5 291 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 SUGCTQ9HAC7 445 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 ARFGAP3Q9NP61 516 aa14.47□□□□□ -0.09
CLCNKA-204ENST00000464764 PRR29P0C7W0 189 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 MICU3Q86XE3 530 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 TTC5Q8N0Z6 440 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 GPR161Q8N6U8 529 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 CCDC12Q8WUD4 166 aaPredicted RBP14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 CPLX3Q8WVH0 158 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 MAP3K14Q99558 947 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 SAMSN1Q9NSI8 373 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 KCNH3Q9ULD8 1083 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 LMAN1P49257 510 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 FAM193AP78312 1265 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 CYB5R4Q7L1T6 521 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 MED15Q96RN5 788 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 MPHOSPH8Q99549 860 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 NFE2L3Q9Y4A8 694 aa14.46□□□□□ -0.09
CLCNKA-204ENST00000464764 SOWAHDA6NJG2 315 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 ZAP70P43403 619 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 TBX2Q13207 712 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 MCM6Q14566 821 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 ZSCAN26Q16670 478 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NCOA7Q8NI08 942 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 RAPGEF4Q8WZA2 1011 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 ZBTB3Q9H5J0 574 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 SEC31BQ9NQW1 1179 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 ADAM21Q9UKJ8 722 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 KDM6AO15550 1401 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NBPF26B4DH59 902 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 EYA2O00167 538 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 ZNF213O14771 459 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 PHKG2P15735 406 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 IL15P40933 162 aaPredicted RBP14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 LONRF2Q1L5Z9 754 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NBPF14Q5TI25 921 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 RESP18Q5W5W9 173 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 CCDC102BQ68D86 513 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 CREBRFQ8IUR6 639 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NBPF15Q8N660 670 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 NBPF3Q9H094 633 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 H7C1W4 665 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 PDE4CQ08493 712 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 CCDC191Q8NCU4 936 aa14.45□□□□□ -0.1
CLCNKA-204ENST00000464764 N4BP1O75113 896 aaKnown RBP14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 ATP2B1P20020 1258 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 CERS3Q8IU89 383 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 TXLNBQ8N3L3 684 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 FBXL16Q8N461 479 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 MAN1B1Q9UKM7 699 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 TEX33O43247 280 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 C10orf67Q8IYJ2 551 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
CLCNKA-204ENST00000464764 GPAA1O43292 621 aa14.43□□□□□ -0.1
CLCNKA-204ENST00000464764 COBLO75128 1261 aa14.43□□□□□ -0.1
CLCNKA-204ENST00000464764 ABL1P00519 1130 aa14.43□□□□□ -0.1
CLCNKA-204ENST00000464764 TPM1P09493 284 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms