RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 TRIOBPQ9H2D6 2365 aa21.69■■□□□ 1.06
HMGN1-210ENST00000464078 PPATQ06203 517 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 KLHDC4Q8TBB5 520 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 WDR66Q8TBY9 1149 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 ZNF341Q9BYN7 854 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 ARHGAP39Q9C0H5 1083 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
HMGN1-210ENST00000464078 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
HMGN1-210ENST00000464078 FAM151AQ8WW52 585 aa21.66■■□□□ 1.06
HMGN1-210ENST00000464078 LPIN2Q92539 896 aa21.66■■□□□ 1.06
HMGN1-210ENST00000464078 KCNH4Q9UQ05 1017 aa21.66■■□□□ 1.06
HMGN1-210ENST00000464078 EYA2O00167 538 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 SLC5A1P13866 664 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 RFX5P48382 616 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-210ENST00000464078 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 C17orf99Q6UX52 265 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 ANKRD23Q86SG2 305 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 FAM9BQ8IZU0 186 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 ZNF112Q9UJU3 913 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 DAGLAQ9Y4D2 1042 aa21.65■■□□□ 1.06
HMGN1-210ENST00000464078 INPP5BP32019 993 aa21.64■■□□□ 1.05
HMGN1-210ENST00000464078 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.64■■□□□ 1.05
HMGN1-210ENST00000464078 SH3TC2Q8TF17 1288 aa21.64■■□□□ 1.05
HMGN1-210ENST00000464078 FXR1P51114 621 aaKnown RBP eCLIP21.63■■□□□ 1.05
HMGN1-210ENST00000464078 NOL9Q5SY16 702 aaKnown RBP21.63■■□□□ 1.05
HMGN1-210ENST00000464078 MIGA2Q7L4E1 593 aa21.63■■□□□ 1.05
HMGN1-210ENST00000464078 SSH1Q8WYL5 1049 aa21.63■■□□□ 1.05
HMGN1-210ENST00000464078 FBXO3Q9UK99 471 aa21.63■■□□□ 1.05
HMGN1-210ENST00000464078 DOCK2Q92608 1830 aa21.63■■□□□ 1.05
HMGN1-210ENST00000464078 ZBTB22O15209 634 aa21.62■■□□□ 1.05
HMGN1-210ENST00000464078 CDC42EP5Q6NZY7 148 aa21.62■■□□□ 1.05
HMGN1-210ENST00000464078 ATG9AQ7Z3C6 839 aa21.62■■□□□ 1.05
HMGN1-210ENST00000464078 SALL1Q9NSC2 1324 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 AK9Q5TCS8 1911 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 PDHXO00330 501 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 MOGSQ13724 837 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 DIXDC1Q155Q3 683 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 TRIM47Q96LD4 638 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 SRRDQ9UH36 339 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 RANBP2P49792 3224 aaKnown RBP21.61■■□□□ 1.05
HMGN1-210ENST00000464078 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
HMGN1-210ENST00000464078 E9PSI1 815 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 CIAO1O76071 339 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 CTGFP29279 349 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 PRDX5P30044 214 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 NFIAQ12857 509 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 FAM198AQ9UFP1 575 aa21.6■■□□□ 1.05
HMGN1-210ENST00000464078 SEMA3EO15041 775 aa21.59■■□□□ 1.05
HMGN1-210ENST00000464078 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-210ENST00000464078 PSMC4P43686 418 aa21.59■■□□□ 1.05
HMGN1-210ENST00000464078 SHISA4Q96DD7 197 aa21.59■■□□□ 1.05
HMGN1-210ENST00000464078 CPA4Q9UI42 421 aa21.59■■□□□ 1.05
HMGN1-210ENST00000464078 COLQQ9Y215 455 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-210ENST00000464078 RFX7Q2KHR2 1363 aa21.59■■□□□ 1.05
HMGN1-210ENST00000464078 MYCP01106 439 aaPredicted RBP21.58■■□□□ 1.05
HMGN1-210ENST00000464078 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.05
HMGN1-210ENST00000464078 TCP10Q12799 353 aa21.58■■□□□ 1.05
HMGN1-210ENST00000464078 ATP2B3Q16720 1220 aa21.58■■□□□ 1.05
HMGN1-210ENST00000464078 ALDH1L2Q3SY69 923 aa21.58■■□□□ 1.05
HMGN1-210ENST00000464078 PARK7Q99497 189 aaKnown RBP21.58■■□□□ 1.05
HMGN1-210ENST00000464078 GNL3LQ9NVN8 582 aaKnown RBP21.58■■□□□ 1.05
HMGN1-210ENST00000464078 MGAMO43451 1857 aa21.58■■□□□ 1.04
HMGN1-210ENST00000464078 PTPRFP10586 1907 aa21.57■■□□□ 1.04
HMGN1-210ENST00000464078 OSBPP22059 807 aa21.57■■□□□ 1.04
HMGN1-210ENST00000464078 HOXD10P28358 340 aa21.57■■□□□ 1.04
HMGN1-210ENST00000464078 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
HMGN1-210ENST00000464078 H0YGN5 161 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 CXCL11O14625 94 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 BCRP11274 1271 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 GRK4P32298 578 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 MTFR1Q15390 333 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 NKX2-3Q8TAU0 364 aa21.56■■□□□ 1.04
HMGN1-210ENST00000464078 MYPNQ86TC9 1320 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
HMGN1-210ENST00000464078 UBE2Q1Q7Z7E8 422 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 USP40Q9NVE5 1235 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 CEP126Q9P2H0 1117 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 DENND2AQ9ULE3 1009 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 DOCK1Q14185 1865 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 GAKO14976 1311 aa21.55■■□□□ 1.04
HMGN1-210ENST00000464078 PDS5AQ29RF7 1337 aaKnown RBP21.55■■□□□ 1.04
HMGN1-210ENST00000464078 ENTPD3O75355 529 aa21.54■■□□□ 1.04
HMGN1-210ENST00000464078 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
HMGN1-210ENST00000464078 UBTFL1P0CB47 393 aaPredicted RBP21.54■■□□□ 1.04
HMGN1-210ENST00000464078 GPAT2Q6NUI2 795 aa21.54■■□□□ 1.04
HMGN1-210ENST00000464078 RAET1EQ8TD07 263 aa21.54■■□□□ 1.04
HMGN1-210ENST00000464078 A0A0G2JLL6 359 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-210ENST00000464078 PHF20L1A8MW92 1017 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 GJB1P08034 283 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 IL15P40933 162 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-210ENST00000464078 PHKA1P46020 1223 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 GJA8P48165 433 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 MAP3K10Q02779 954 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 SLFN5Q08AF3 891 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 PRRT2Q7Z6L0 340 aaPredicted RBP21.53■■□□□ 1.04
HMGN1-210ENST00000464078 ZFPM1Q8IX07 1006 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 SCYL3Q8IZE3 742 aa21.53■■□□□ 1.04
HMGN1-210ENST00000464078 ZGPATQ8N5A5 531 aaKnown RBP21.53■■□□□ 1.04
HMGN1-210ENST00000464078 SIL1Q9H173 461 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms