RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
TMEM54-203ENST00000463914 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 ZCCHC17Q9NP64 241 aaKnown RBP12.84□□□□□ -0.35
TMEM54-203ENST00000463914 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 PTPRCP08575 1304 aa12.84□□□□□ -0.35
TMEM54-203ENST00000463914 EYA2O00167 538 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 SLC5A1P13866 664 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 CTGFP29279 349 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 TCP10Q12799 353 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 NFIAQ12857 509 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 MYH2Q9UKX2 1941 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 ADGRA2Q96PE1 1338 aa12.83□□□□□ -0.36
TMEM54-203ENST00000463914 MGAMO43451 1857 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 PTPRFP10586 1907 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 BRCA2P51587 3418 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 WDHD1O75717 1129 aaPredicted RBP12.82□□□□□ -0.36
TMEM54-203ENST00000463914 PRDX5P30044 214 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 KIF22Q14807 665 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 HOOK2Q96ED9 719 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
TMEM54-203ENST00000463914 TRIOBPQ9H2D6 2365 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 FXR1P51114 621 aaKnown RBP eCLIP12.81□□□□□ -0.36
TMEM54-203ENST00000463914 PPATQ06203 517 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 LPIN2Q92539 896 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 SIL1Q9H173 461 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 KCNH4Q9UQ05 1017 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 CEP290O15078 2479 aa12.81□□□□□ -0.36
TMEM54-203ENST00000463914 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 PDHXO00330 501 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
TMEM54-203ENST00000463914 PSMC4P43686 418 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 MOGSQ13724 837 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 MTFR1Q15390 333 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 ANKRD23Q86SG2 305 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 ZNF112Q9UJU3 913 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
TMEM54-203ENST00000463914 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
TMEM54-203ENST00000463914 PHIPQ8WWQ0 1821 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 H0YGN5 161 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 OSBPP22059 807 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 PHKA1P46020 1223 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 ATP2B3Q16720 1220 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 NOL9Q5SY16 702 aaKnown RBP12.79□□□□□ -0.36
TMEM54-203ENST00000463914 ZFPM1Q8IX07 1006 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 SRRDQ9UH36 339 aa12.79□□□□□ -0.36
TMEM54-203ENST00000463914 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
TMEM54-203ENST00000463914 GNRH1P01148 92 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
TMEM54-203ENST00000463914 ADORA1P30542 326 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 PRMT2P55345 433 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 USP40Q9NVE5 1235 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 MYPNQ86TC9 1320 aa12.78□□□□□ -0.36
TMEM54-203ENST00000463914 E9PSI1 815 aa12.77□□□□□ -0.37
TMEM54-203ENST00000463914 FMNL1O95466 1100 aaPredicted RBP12.77□□□□□ -0.37
TMEM54-203ENST00000463914 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
TMEM54-203ENST00000463914 SLURP2P0DP57 97 aa12.77□□□□□ -0.37
TMEM54-203ENST00000463914 CYP2C8P10632 490 aa12.77□□□□□ -0.37
TMEM54-203ENST00000463914 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
TMEM54-203ENST00000463914 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.37
TMEM54-203ENST00000463914 PA2G4Q9UQ80 394 aaKnown RBP12.77□□□□□ -0.37
TMEM54-203ENST00000463914 SALL1Q9NSC2 1324 aa12.77□□□□□ -0.37
TMEM54-203ENST00000463914 CIAO1O76071 339 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 BCRP11274 1271 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 GRK4P32298 578 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 RGS3P49796 1198 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 PRKCZQ05513 592 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 CEP126Q9P2H0 1117 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 GAKO14976 1311 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 DOCK3Q8IZD9 2030 aa12.76□□□□□ -0.37
TMEM54-203ENST00000463914 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
TMEM54-203ENST00000463914 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
TMEM54-203ENST00000463914 FBXO3Q9UK99 471 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
TMEM54-203ENST00000463914 LRRFIP2Q9Y608 721 aaKnown RBP12.75□□□□□ -0.37
TMEM54-203ENST00000463914 ATAD5Q96QE3 1844 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms