RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 B4E1Z4 1266 aa15.21■□□□□ 0.02
CHRNA4-202ENST00000463705 CEP112Q8N8E3 955 aa15.21■□□□□ 0.02
CHRNA4-202ENST00000463705 BBXQ8WY36 941 aaPredicted RBP15.21■□□□□ 0.02
CHRNA4-202ENST00000463705 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.02
CHRNA4-202ENST00000463705 PHKG2P15735 406 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 TM6SF1Q9BZW5 370 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 HSPA4P34932 840 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 CTR9Q6PD62 1173 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 IMPG2Q9BZV3 1241 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 STK32BQ9NY57 414 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 CBX1P83916 185 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 DNAJC10Q8IXB1 793 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 SPATA5Q8NB90 893 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 TCIRG1Q13488 830 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 KIAA0753Q2KHM9 967 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 ZKSCAN3Q9BRR0 538 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 ZCCHC11Q5TAX3 1644 aaKnown RBP15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 KRT86O43790 486 aa15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.2■□□□□ 0.02
CHRNA4-202ENST00000463705 METP08581 1390 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 PHACTR2O75167 634 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 MYL5Q02045 173 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 ANO1Q5XXA6 986 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 KIF1BO60333 1816 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 RPL13P26373 211 aaKnown RBP15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 ACTN2P35609 894 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 MMRN2Q9H8L6 949 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 KAT6BQ8WYB5 2073 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 ARHGEF10LQ9HCE6 1279 aa15.19■□□□□ 0.02
CHRNA4-202ENST00000463705 KCNQ3O43525 872 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 CUTAO60888 179 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 DDX17Q92841 729 aaKnown RBP15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 CTAGE9A4FU28 777 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 HSF2BPO75031 334 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 UBXN1Q04323 297 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 CNGA4Q8IV77 575 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 TBC1D22AQ8WUA7 517 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 GSPT1P15170 499 aaKnown RBP15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 TRIM14Q14142 442 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
CHRNA4-202ENST00000463705 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 INCENPQ9NQS7 918 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 CTSWP56202 376 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 DNAI1Q9UI46 699 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 SYNCQ9H7C4 482 aa15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-202ENST00000463705 FSD2A1L4K1 749 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 HAUS3Q68CZ6 603 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 MAATS1Q7Z4T9 603 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 BCCIPQ9P287 314 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 NCBP1Q09161 790 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 GIGYF2Q6Y7W6 1299 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 NCOA5Q9HCD5 579 aaKnown RBP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 PRDM15P57071 1507 aaPredicted RBP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 KRT25Q7Z3Z0 450 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 NDUFB9Q9Y6M9 179 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 NPHP4O75161 1426 aaPredicted RBP15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 DRC1Q96MC2 740 aa15.16■□□□□ 0.02
CHRNA4-202ENST00000463705 ZNF174Q15697 407 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 CCDC155Q8N6L0 562 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 ZSWIM4Q9H7M6 989 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 IFNKQ9P0W0 207 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 TET3O43151 1660 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 MSANTD4Q8NCY6 345 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 LRRC45Q96CN5 670 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 ARPP21Q9UBL0 812 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 ZAP70P43403 619 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 LETM2Q2VYF4 491 aa15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 LUC7L2Q9Y383 392 aaKnown RBP15.15■□□□□ 0.02
CHRNA4-202ENST00000463705 TAF5LO75529 589 aa15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 SLU7O95391 586 aaKnown RBP15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 PTGS1P23219 599 aa15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 STX17P56962 302 aa15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 DPP8Q6V1X1 898 aaPredicted RBP15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 APBB1IPQ7Z5R6 666 aaPredicted RBP15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 GOLGA1Q92805 767 aa15.14■□□□□ 0.01
CHRNA4-202ENST00000463705 PODXL2Q9NZ53 605 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms