RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TXNDC2Q86VQ3 553 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 KLHDC7BQ96G42 594 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 LATS2Q9NRM7 1088 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 TIMELESSQ9UNS1 1208 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
SCFD1-204ENST00000463622 PHACTR2O75167 634 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-204ENST00000463622 H2AFB1P0C5Y9 115 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 H2AFB2P0C5Z0 115 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 GLB1P16278 677 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 PTPRAP18433 802 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 SF3B2Q13435 895 aaKnown RBP5.61□□□□□ -1.51
SCFD1-204ENST00000463622 SLC7A3Q8WY07 619 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 MUC3BQ9H195 1237 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 UGGT1Q9NYU2 1555 aa5.61□□□□□ -1.51
SCFD1-204ENST00000463622 INO80Q9ULG1 1556 aaPredicted RBP5.61□□□□□ -1.51
SCFD1-204ENST00000463622 SUPT6HQ7KZ85 1726 aaKnown RBP5.61□□□□□ -1.51
SCFD1-204ENST00000463622 SRCAPQ6ZRS2 3230 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 H3BRB1 525 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 PDE2AO00408 941 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-204ENST00000463622 TM4SF5O14894 197 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 KCNA6P17658 529 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ACAD11Q709F0 780 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 CACTIN-AS1Q8N1I8 211 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 RETREG2Q8NC44 543 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 OSMRQ99650 979 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ZKSCAN3Q9BRR0 538 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 TUT1Q9H6E5 874 aaKnown RBP5.6□□□□□ -1.51
SCFD1-204ENST00000463622 SCO2A0A1W2PP80 73 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ADAM11O75078 769 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ECM1Q16610 540 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.6□□□□□ -1.51
SCFD1-204ENST00000463622 MAP4K3Q8IVH8 894 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 UBASH3BQ8TF42 649 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 UBL7Q96S82 380 aaPredicted RBP5.6□□□□□ -1.51
SCFD1-204ENST00000463622 ADAM19Q9H013 955 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 USTQ9Y2C2 406 aa5.6□□□□□ -1.51
SCFD1-204ENST00000463622 CDC42BPAQ5VT25 1732 aa5.59□□□□□ -1.51
SCFD1-204ENST00000463622 ICMTO60725 284 aa5.59□□□□□ -1.51
SCFD1-204ENST00000463622 FAM117BQ6P1L5 589 aa5.59□□□□□ -1.51
SCFD1-204ENST00000463622 DZIP1LQ8IYY4 767 aaKnown RBP5.59□□□□□ -1.51
SCFD1-204ENST00000463622 FOXD4L4Q8WXT5 416 aaPredicted RBP5.59□□□□□ -1.51
SCFD1-204ENST00000463622 SRA1Q9HD15 236 aaKnown RBP5.59□□□□□ -1.51
SCFD1-204ENST00000463622 TMEM94Q12767 1356 aa5.59□□□□□ -1.51
SCFD1-204ENST00000463622 KDM5DQ9BY66 1539 aa5.59□□□□□ -1.51
SCFD1-204ENST00000463622 FAM177BA6PVY3 158 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 NLRP12P59046 1061 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 DUOXA2Q1HG44 320 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 GLYCTKQ8IVS8 523 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 ASAP3Q8TDY4 903 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 PMEPA1Q969W9 287 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 NXPE3Q969Y0 559 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 EID1Q9Y6B2 187 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 NCOA2Q15596 1464 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 SCAF11Q99590 1463 aaKnown RBP5.58□□□□□ -1.52
SCFD1-204ENST00000463622 FYCO1Q9BQS8 1478 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 ARHGAP23Q9P227 1491 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 METTL12A8MUP2 240 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 H3BRJ5 948 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 TSPY4P0CV99 314 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 TSPY10P0CW01 314 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 USP5P45974 858 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 CABP4P57796 275 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 PEAR1Q5VY43 1037 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-204ENST00000463622 ZNF772Q68DY9 489 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-204ENST00000463622 PRR23CQ6ZRP0 262 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 GJD3Q8N144 294 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 SNX29Q8TEQ0 813 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 ZFYVE28Q9HCC9 887 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 JCADQ9P266 1359 aa5.58□□□□□ -1.52
SCFD1-204ENST00000463622 STRCP1A6NGW2 1772 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
SCFD1-204ENST00000463622 TIAM1Q13009 1591 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 MTUS2Q5JR59 1369 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 USPL1Q5W0Q7 1092 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 TMEM102Q8N9M5 508 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-204ENST00000463622 KLHL23Q8NBE8 558 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 POLR1AO95602 1720 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-204ENST00000463622 SLIT1O75093 1534 aa5.57□□□□□ -1.52
SCFD1-204ENST00000463622 ERVK-7P63135 1459 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 TMEM2Q9UHN6 1383 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 SPATA31A6Q5VVP1 1343 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 SOX1O00570 391 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-204ENST00000463622 ARHGAP4P98171 946 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 EHHADHQ08426 723 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 BRPF3Q9ULD4 1205 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 AMOTL2Q9Y2J4 779 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 IQGAP1P46940 1657 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 EDN3P14138 238 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 RXRBP28702 533 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 Q6ZS46 218 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 VN1R5Q7Z5H4 357 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 ADGBQ8N7X0 1667 aa5.56□□□□□ -1.52
SCFD1-204ENST00000463622 SYNMO15061 1565 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 ARHGAP31Q2M1Z3 1444 aa5.55□□□□□ -1.52
SCFD1-204ENST00000463622 IDI1Q13907 227 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms