RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PAXIP1Q6ZW49 1069 aaPredicted RBP15.97■□□□□ 0.15
R3HDM1-213ENST00000463230 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
R3HDM1-213ENST00000463230 MROH7-TTC4A0A0A0MT08 1334 aa15.97■□□□□ 0.15
R3HDM1-213ENST00000463230 PPP1R12BO60237 982 aaPredicted RBP15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 MAP2K1Q02750 393 aaPredicted RBP15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 MECOMQ03112 1051 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 CYP4F22Q6NT55 531 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 SSC5DA1L4H1 1573 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 CDC42EP5Q6NZY7 148 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
R3HDM1-213ENST00000463230 DOCK2Q92608 1830 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 GPR75-ASB3A0A0A6YYF3 556 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 SLC10A3P09131 477 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 TTLL12Q14166 644 aaPredicted RBP15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 LDLRAD1Q5T700 205 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 PRAMEF18Q5VWM3 479 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 PI16Q6UXB8 463 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 TEPSINQ96N21 525 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 SCAF8Q9UPN6 1271 aaKnown RBP15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 TCP10L2B9ZVM9 353 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 TTF1Q15361 905 aaPredicted RBP15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 CERS3Q8IU89 383 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 FAM151AQ8WW52 585 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 IDI2Q9BXS1 227 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 USP40Q9NVE5 1235 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 PCDHB15Q9Y5E8 787 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
R3HDM1-213ENST00000463230 ENTPD3O75355 529 aa15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 CYP2E1P05181 493 aaPredicted RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 IREB2P48200 963 aaKnown RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 FAM155AB1AL88 458 aaPredicted RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 ZAP70P43403 619 aa15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 NBPF12Q5TAG4 269 aaPredicted RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 NOL10Q9BSC4 688 aaKnown RBP15.94■□□□□ 0.14
R3HDM1-213ENST00000463230 APBB1O00213 710 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 PLCG2P16885 1265 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 BTDP43251 543 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 HDAC1Q13547 482 aaPredicted RBP15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 TBC1D9Q6ZT07 1266 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 ANGEL1Q9UNK9 670 aaKnown RBP15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 COL2A1P02458 1487 aaPredicted RBP15.93■□□□□ 0.14
R3HDM1-213ENST00000463230 UBE2Q2LH0YL09 131 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 NAA16Q6N069 864 aaPredicted RBP15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 RASAL3Q86YV0 1011 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 AIDAQ96BJ3 306 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 TMEM39BQ9GZU3 492 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 CA12O43570 354 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 ATP5JP18859 108 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 ZNF384Q8TF68 577 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 LAMB1P07942 1786 aa15.92■□□□□ 0.14
R3HDM1-213ENST00000463230 BAG3O95817 575 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 PPP4CP60510 307 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 GPATCH3Q96I76 525 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 PIH1D3Q9NQM4 214 aaKnown RBP15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 CEP350Q5VT06 3117 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 USP2O75604 605 aaPredicted RBP15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 CACNB3P54284 484 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 MAP3K12Q12852 859 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 ANKRD13AQ8IZ07 590 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 GCC1Q96CN9 775 aa15.91■□□□□ 0.14
R3HDM1-213ENST00000463230 MYO5AQ9Y4I1 1855 aaKnown RBP15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 MOB2Q70IA6 237 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 BEGAINQ9BUH8 593 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 FAM198AQ9UFP1 575 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 OTOFQ9HC10 1997 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 AOC2O75106 756 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 RHBDL3P58872 404 aa15.9■□□□□ 0.14
R3HDM1-213ENST00000463230 WDHD1O75717 1129 aaPredicted RBP15.89■□□□□ 0.13
R3HDM1-213ENST00000463230 RGS3P49796 1198 aa15.89■□□□□ 0.13
R3HDM1-213ENST00000463230 GRM1Q13255 1194 aa15.89■□□□□ 0.13
R3HDM1-213ENST00000463230 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
R3HDM1-213ENST00000463230 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
R3HDM1-213ENST00000463230 ZBTB48P10074 688 aaPredicted RBP15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 NFIAQ12857 509 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 SLC10A4Q96EP9 437 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 HAUS7Q99871 368 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 ZNF341Q9BYN7 854 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 ECHDC1Q9NTX5 307 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 ATRNL1Q5VV63 1379 aa15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
R3HDM1-213ENST00000463230 MAP3K9P80192 1104 aa15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 PRKG1Q13976 671 aa15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 SPRYD7Q5W111 196 aa15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
R3HDM1-213ENST00000463230 AK9Q5TCS8 1911 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms