RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 C10orf71Q711Q0 1435 aa10.49□□□□□ -0.73
VPS45-205ENST00000462852 BRCA1P38398 1863 aaKnown RBP10.49□□□□□ -0.73
VPS45-205ENST00000462852 CACNA1SQ13698 1873 aa10.49□□□□□ -0.73
VPS45-205ENST00000462852 A0A087WZG4 1122 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 GYS1P13807 737 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 RFC4P35249 363 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 ZBTB38Q8NAP3 1195 aaPredicted RBP10.48□□□□□ -0.73
VPS45-205ENST00000462852 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
VPS45-205ENST00000462852 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
VPS45-205ENST00000462852 FOXJ1Q92949 421 aa10.48□□□□□ -0.73
VPS45-205ENST00000462852 NOP58Q9Y2X3 529 aaKnown RBP10.48□□□□□ -0.73
VPS45-205ENST00000462852 A0A0G2JLW4 131 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 VARSP26640 1264 aaKnown RBP10.47□□□□□ -0.73
VPS45-205ENST00000462852 CLEC4GQ6UXB4 293 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 ARHGAP27Q6ZUM4 889 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 RWDD1Q9H446 243 aaPredicted RBP10.47□□□□□ -0.73
VPS45-205ENST00000462852 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 DUOX1Q9NRD9 1551 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 DOCK2Q92608 1830 aa10.47□□□□□ -0.73
VPS45-205ENST00000462852 AKAP11Q9UKA4 1901 aa10.46□□□□□ -0.73
VPS45-205ENST00000462852 DDR1Q08345 913 aa10.46□□□□□ -0.73
VPS45-205ENST00000462852 C16orf71Q8IYS4 520 aaPredicted RBP10.46□□□□□ -0.73
VPS45-205ENST00000462852 GCC1Q96CN9 775 aa10.46□□□□□ -0.73
VPS45-205ENST00000462852 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.46□□□□□ -0.73
VPS45-205ENST00000462852 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
VPS45-205ENST00000462852 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
VPS45-205ENST00000462852 PA2G4Q9UQ80 394 aaKnown RBP10.46□□□□□ -0.73
VPS45-205ENST00000462852 EXOC6BQ9Y2D4 811 aa10.46□□□□□ -0.73
VPS45-205ENST00000462852 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 CSF1RP07333 972 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 DPEP1P16444 411 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 CTSWP56202 376 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 PTPN12Q05209 780 aaKnown RBP10.45□□□□□ -0.74
VPS45-205ENST00000462852 CTDSPL2Q05D32 466 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 NFIXQ14938 502 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 PARP10Q53GL7 1025 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 MPNDQ8N594 471 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 OTUD7AQ8TE49 926 aaPredicted RBP10.45□□□□□ -0.74
VPS45-205ENST00000462852 FAM89AQ96GI7 184 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 WASF2Q9Y6W5 498 aa10.45□□□□□ -0.74
VPS45-205ENST00000462852 CHD1LQ86WJ1 897 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 KLHDC4Q8TBB5 520 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 NMRK2Q9NPI5 230 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 COPRSQ9NQ92 184 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 PIM2Q9P1W9 311 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
VPS45-205ENST00000462852 ZNF652Q9Y2D9 606 aa10.44□□□□□ -0.74
VPS45-205ENST00000462852 MYH7P12883 1935 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 MYH13Q9UKX3 1938 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 SH3TC1Q8TE82 1336 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 POLRMTO00411 1230 aaKnown RBP10.43□□□□□ -0.74
VPS45-205ENST00000462852 HMMRO75330 724 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 SASH1O94885 1247 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 FSTL1Q12841 308 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 DALRD3Q5D0E6 543 aaKnown RBP10.43□□□□□ -0.74
VPS45-205ENST00000462852 C9orf131Q5VYM1 1079 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 LMBR1LQ6UX01 489 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 ATG9AQ7Z3C6 839 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 DNAJC5GQ8N7S2 189 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 TTLL11Q8NHH1 800 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 LNPKQ9C0E8 428 aa10.43□□□□□ -0.74
VPS45-205ENST00000462852 MYO5AQ9Y4I1 1855 aaKnown RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 SNED1Q8TER0 1413 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 IRS4O14654 1257 aaPredicted RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 GSPT1P15170 499 aaKnown RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 TM4SF1P30408 202 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 PPP2R2DQ66LE6 453 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 SLC51AQ86UW1 340 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 UTP14AQ9BVJ6 771 aaKnown RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 GREM2Q9H772 168 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 TRMT112Q9UI30 125 aaKnown RBP10.42□□□□□ -0.74
VPS45-205ENST00000462852 MAST2Q6P0Q8 1798 aa10.42□□□□□ -0.74
VPS45-205ENST00000462852 KCNA3P22001 575 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 ERFEQ4G0M1 354 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 PRR5LQ6MZQ0 368 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 PLEKHM2Q8IWE5 1019 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 VGLL2Q8N8G2 317 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 RHPN1Q8TCX5 695 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 LRRN4Q8WUT4 740 aa10.41□□□□□ -0.74
VPS45-205ENST00000462852 PDE8AO60658 829 aa10.4□□□□□ -0.74
VPS45-205ENST00000462852 HCLS1P14317 486 aaPredicted RBP10.4□□□□□ -0.74
VPS45-205ENST00000462852 C8orf34Q49A92 452 aa10.4□□□□□ -0.74
VPS45-205ENST00000462852 SLC10A5Q5PT55 438 aa10.4□□□□□ -0.74
VPS45-205ENST00000462852 KLRG1Q96E93 195 aa10.4□□□□□ -0.74
VPS45-205ENST00000462852 TLR7Q9NYK1 1049 aaKnown RBP10.4□□□□□ -0.74
VPS45-205ENST00000462852 RNF181Q9P0P0 153 aa10.4□□□□□ -0.74
VPS45-205ENST00000462852 ZC3H4Q9UPT8 1303 aaKnown RBP10.39□□□□□ -0.75
VPS45-205ENST00000462852 COL1A1P02452 1464 aaPredicted RBP10.39□□□□□ -0.75
VPS45-205ENST00000462852 CIAO1O76071 339 aa10.39□□□□□ -0.75
VPS45-205ENST00000462852 RGS3P49796 1198 aa10.39□□□□□ -0.75
VPS45-205ENST00000462852 NNTQ13423 1086 aa10.39□□□□□ -0.75
VPS45-205ENST00000462852 SF3B3Q15393 1217 aaKnown RBP10.39□□□□□ -0.75
VPS45-205ENST00000462852 CRY2Q49AN0 593 aa10.39□□□□□ -0.75
VPS45-205ENST00000462852 LRRC24Q50LG9 513 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms