RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 FOXN1O15353 648 aa22.7■■□□□ 1.22
CDKN1A-206ENST00000462537 RASAL3Q86YV0 1011 aa22.7■■□□□ 1.22
CDKN1A-206ENST00000462537 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.22
CDKN1A-206ENST00000462537 RAI14Q9P0K7 980 aa22.7■■□□□ 1.22
CDKN1A-206ENST00000462537 MECOMQ03112 1051 aa22.69■■□□□ 1.22
CDKN1A-206ENST00000462537 CDC42EP5Q6NZY7 148 aa22.69■■□□□ 1.22
CDKN1A-206ENST00000462537 ZIC5Q96T25 663 aa22.69■■□□□ 1.22
CDKN1A-206ENST00000462537 USP40Q9NVE5 1235 aa22.69■■□□□ 1.22
CDKN1A-206ENST00000462537 LRP2BPQ9P2M1 347 aa22.69■■□□□ 1.22
CDKN1A-206ENST00000462537 RAB11FIP3O75154 756 aa22.68■■□□□ 1.22
CDKN1A-206ENST00000462537 IREB2P48200 963 aaKnown RBP22.68■■□□□ 1.22
CDKN1A-206ENST00000462537 FKBP1CQ5VVH2 108 aa22.68■■□□□ 1.22
CDKN1A-206ENST00000462537 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
CDKN1A-206ENST00000462537 AKAP11Q9UKA4 1901 aa22.68■■□□□ 1.22
CDKN1A-206ENST00000462537 MROH7-TTC4A0A0A0MT08 1334 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 CTCFP49711 727 aaPredicted RBP22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 GSTO1P78417 241 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 KIF23Q02241 960 aaPredicted RBP22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 FAM83AQ86UY5 434 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 CDAN1Q8IWY9 1227 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 ZNF512BQ96KM6 892 aaPredicted RBP22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 TEPSINQ96N21 525 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 MAST2Q6P0Q8 1798 aa22.67■■□□□ 1.22
CDKN1A-206ENST00000462537 GAKO14976 1311 aa22.66■■□□□ 1.22
CDKN1A-206ENST00000462537 IFIT2P09913 472 aaKnown RBP22.66■■□□□ 1.22
CDKN1A-206ENST00000462537 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
CDKN1A-206ENST00000462537 LDHCP07864 332 aa22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 BTDP43251 543 aa22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 ZAP70P43403 619 aa22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 TCP10Q12799 353 aa22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 LDLRAD1Q5T700 205 aa22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 NSUN4Q96CB9 384 aaKnown RBP22.65■■□□□ 1.22
CDKN1A-206ENST00000462537 OTOFQ9HC10 1997 aa22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 USP2O75604 605 aaPredicted RBP22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 CYP2E1P05181 493 aaPredicted RBP22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 MKRN3Q13064 507 aaKnown RBP22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 SLC10A4Q96EP9 437 aa22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 FAM163AQ96GL9 167 aaPredicted RBP22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 AK9Q5TCS8 1911 aa22.64■■□□□ 1.21
CDKN1A-206ENST00000462537 MYO5AQ9Y4I1 1855 aaKnown RBP22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 NFIAQ12857 509 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 FAM151AQ8WW52 585 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 HOOK2Q96ED9 719 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 CLMNQ96JQ2 1002 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 CRBNQ96SW2 442 aa22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 RPAP1Q9BWH6 1393 aaPredicted RBP22.63■■□□□ 1.21
CDKN1A-206ENST00000462537 ANKRD13AQ8IZ07 590 aa22.62■■□□□ 1.21
CDKN1A-206ENST00000462537 NOL10Q9BSC4 688 aaKnown RBP22.62■■□□□ 1.21
CDKN1A-206ENST00000462537 LRRCC1Q9C099 1032 aa22.62■■□□□ 1.21
CDKN1A-206ENST00000462537 GPR75-ASB3A0A0A6YYF3 556 aa22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 HSPA8P11142 646 aaKnown RBP22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 LBX1P52954 281 aa22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 NAA16Q6N069 864 aaPredicted RBP22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 PIH1D3Q9NQM4 214 aaKnown RBP22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 FAM198AQ9UFP1 575 aa22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 TSKSQ9UJT2 592 aa22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 NDUFB9Q9Y6M9 179 aa22.61■■□□□ 1.21
CDKN1A-206ENST00000462537 UNCXA6NJT0 531 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 CA12O43570 354 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 RGS3P49796 1198 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 PICALMQ13492 652 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 COL13A1Q5TAT6 717 aaPredicted RBP22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 DCAF15Q66K64 600 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 CSRNP1Q96S65 589 aa22.6■■□□□ 1.21
CDKN1A-206ENST00000462537 IDH1O75874 414 aaKnown RBP22.59■■□□□ 1.21
CDKN1A-206ENST00000462537 REM2Q8IYK8 340 aaPredicted RBP22.59■■□□□ 1.21
CDKN1A-206ENST00000462537 IDI2Q9BXS1 227 aa22.59■■□□□ 1.21
CDKN1A-206ENST00000462537 CSADQ9Y600 493 aa22.59■■□□□ 1.21
CDKN1A-206ENST00000462537 DOCK2Q92608 1830 aa22.59■■□□□ 1.21
CDKN1A-206ENST00000462537 SMARCA5O60264 1052 aaPredicted RBP22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 SPRYD7Q5W111 196 aa22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 MIGA2Q7L4E1 593 aa22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 ZSCAN29Q8IWY8 852 aaPredicted RBP22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 WNK4Q96J92 1243 aa22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 ELP3Q9H9T3 547 aa22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 PCDHB15Q9Y5E8 787 aa22.58■■□□□ 1.21
CDKN1A-206ENST00000462537 ENTPD3O75355 529 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 WDHD1O75717 1129 aaPredicted RBP22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 BAG3O95817 575 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 RHBDL3P58872 404 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 MAP3K9P80192 1104 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 ZFPM1Q8IX07 1006 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 WRNIP1Q96S55 665 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 ZNF341Q9BYN7 854 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 DCTPP1Q9H773 170 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 AATFQ9NY61 560 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 RFX7Q2KHR2 1363 aa22.57■■□□□ 1.2
CDKN1A-206ENST00000462537 SREBF2Q12772 1141 aa22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 TEX11Q8IYF3 940 aa22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 ANTXR1Q9H6X2 564 aa22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 DDX4Q9NQI0 724 aaKnown RBP22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 PRDM10Q9NQV6 1147 aa22.56■■□□□ 1.2
CDKN1A-206ENST00000462537 IGSF3O75054 1194 aa22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 TRPA1O75762 1119 aa22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 MAP4K4O95819 1239 aaPredicted RBP22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 ZBTB48P10074 688 aaPredicted RBP22.55■■□□□ 1.2
CDKN1A-206ENST00000462537 VGLL4Q14135 290 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms