RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 SALL1Q9NSC2 1324 aa17.01■□□□□ 0.31
RBM39-222ENST00000461849 FKBP1CQ5VVH2 108 aa17.01■□□□□ 0.31
RBM39-222ENST00000461849 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
RBM39-222ENST00000461849 ELP3Q9H9T3 547 aa17.01■□□□□ 0.31
RBM39-222ENST00000461849 CSADQ9Y600 493 aa17.01■□□□□ 0.31
RBM39-222ENST00000461849 PNMA6EA0A0J9YXQ4 647 aa17■□□□□ 0.31
RBM39-222ENST00000461849 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
RBM39-222ENST00000461849 MAP3K9P80192 1104 aa17■□□□□ 0.31
RBM39-222ENST00000461849 OS9Q13438 667 aaPredicted RBP17■□□□□ 0.31
RBM39-222ENST00000461849 DIXDC1Q155Q3 683 aa17■□□□□ 0.31
RBM39-222ENST00000461849 DZIP1Q86YF9 867 aaKnown RBP17■□□□□ 0.31
RBM39-222ENST00000461849 CDAN1Q8IWY9 1227 aa17■□□□□ 0.31
RBM39-222ENST00000461849 SLF2Q8IX21 1173 aa17■□□□□ 0.31
RBM39-222ENST00000461849 RPAP2Q8IXW5 612 aaPredicted RBP17■□□□□ 0.31
RBM39-222ENST00000461849 ABCF2Q9UG63 623 aa17■□□□□ 0.31
RBM39-222ENST00000461849 DAGLAQ9Y4D2 1042 aa17■□□□□ 0.31
RBM39-222ENST00000461849 ERICH6BQ5W0A0 696 aa16.99■□□□□ 0.31
RBM39-222ENST00000461849 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
RBM39-222ENST00000461849 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
RBM39-222ENST00000461849 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
RBM39-222ENST00000461849 CTU1Q7Z7A3 348 aaKnown RBP16.99■□□□□ 0.31
RBM39-222ENST00000461849 IFNL1Q8IU54 200 aa16.99■□□□□ 0.31
RBM39-222ENST00000461849 ZNF296Q8WUU4 475 aaPredicted RBP16.99■□□□□ 0.31
RBM39-222ENST00000461849 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
RBM39-222ENST00000461849 GPR25O00155 361 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 ZBTB22O15209 634 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 CDC42EP5Q6NZY7 148 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.98■□□□□ 0.31
RBM39-222ENST00000461849 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
RBM39-222ENST00000461849 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
RBM39-222ENST00000461849 ATP8B2P98198 1209 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 TCP10Q12799 353 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 VGLL4Q14135 290 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
RBM39-222ENST00000461849 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.97■□□□□ 0.31
RBM39-222ENST00000461849 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 WRNIP1Q96S55 665 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
RBM39-222ENST00000461849 FKTNO75072 461 aa16.96■□□□□ 0.31
RBM39-222ENST00000461849 HMMRO75330 724 aa16.96■□□□□ 0.31
RBM39-222ENST00000461849 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
RBM39-222ENST00000461849 POLA2Q14181 598 aa16.96■□□□□ 0.31
RBM39-222ENST00000461849 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
RBM39-222ENST00000461849 ZNF341Q9BYN7 854 aa16.96■□□□□ 0.31
RBM39-222ENST00000461849 RPAP1Q9BWH6 1393 aaPredicted RBP16.96■□□□□ 0.31
RBM39-222ENST00000461849 GJA5P36382 358 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 GTF2A2P52657 109 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 PKN2Q16513 984 aaKnown RBP16.95■□□□□ 0.3
RBM39-222ENST00000461849 MIGA2Q7L4E1 593 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 OTOFQ9HC10 1997 aa16.95■□□□□ 0.3
RBM39-222ENST00000461849 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
RBM39-222ENST00000461849 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
RBM39-222ENST00000461849 NFIAQ12857 509 aa16.94■□□□□ 0.3
RBM39-222ENST00000461849 CCDC158Q5M9N0 1113 aa16.94■□□□□ 0.3
RBM39-222ENST00000461849 PCDHB15Q9Y5E8 787 aa16.94■□□□□ 0.3
RBM39-222ENST00000461849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.94■□□□□ 0.3
RBM39-222ENST00000461849 AK9Q5TCS8 1911 aa16.94■□□□□ 0.3
RBM39-222ENST00000461849 TESPA1A2RU30 521 aaPredicted RBP16.93■□□□□ 0.3
RBM39-222ENST00000461849 GSTO1P78417 241 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 ERO1BQ86YB8 467 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 CNKSR2Q8WXI2 1034 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 ZKSCAN4Q969J2 545 aaPredicted RBP16.93■□□□□ 0.3
RBM39-222ENST00000461849 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 HMG20BQ9P0W2 317 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 GAKO14976 1311 aa16.93■□□□□ 0.3
RBM39-222ENST00000461849 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 CCL15-CCL14A0A0B4J2E2 113 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 SPDYE5A6NIY4 337 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
RBM39-222ENST00000461849 LDHCP07864 332 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
RBM39-222ENST00000461849 BTDP43251 543 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 MECOMQ03112 1051 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
RBM39-222ENST00000461849 CCL15Q16663 113 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 ZSCAN29Q8IWY8 852 aaPredicted RBP16.92■□□□□ 0.3
RBM39-222ENST00000461849 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
RBM39-222ENST00000461849 R3HDMLQ9H3Y0 253 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 MROH7-TTC4A0A0A0MT08 1334 aa16.92■□□□□ 0.3
RBM39-222ENST00000461849 ENTPD3O75355 529 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 RGS3P49796 1198 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 PTPN18Q99952 460 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 LRP2BPQ9P2M1 347 aa16.91■□□□□ 0.3
RBM39-222ENST00000461849 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms