RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NBPF9Q3BBW0 867 aa18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 TDRD7Q8NHU6 1098 aaKnown RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 CDCA5Q96FF9 252 aa18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 RBM19Q9Y4C8 960 aaKnown RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 POLR2AP24928 1970 aaKnown RBP18.28■□□□□ 0.52
TMEM39A-203ENST00000461654 FAM205AQ6ZU69 1335 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 HUNKP57058 714 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 FKBP1BP68106 108 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 CERS5Q8N5B7 392 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 MTMR14Q8NCE2 650 aa18.27■□□□□ 0.52
TMEM39A-203ENST00000461654 RAD50Q92878 1312 aa18.26■□□□□ 0.51
TMEM39A-203ENST00000461654 PI16Q6UXB8 463 aa18.26■□□□□ 0.51
TMEM39A-203ENST00000461654 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
TMEM39A-203ENST00000461654 IQSEC3Q9UPP2 1182 aaPredicted RBP18.26■□□□□ 0.51
TMEM39A-203ENST00000461654 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 ZBTB22O15209 634 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 RNF113AO15541 343 aaKnown RBP18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 SGSM2O43147 1006 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 CYP2E1P05181 493 aaPredicted RBP18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 NOGQ13253 232 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 RGMBQ6NW40 437 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 CCDC102AQ96A19 550 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 ANTXR1Q9H6X2 564 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 ANO2Q9NQ90 1003 aa18.25■□□□□ 0.51
TMEM39A-203ENST00000461654 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 AOC2O75106 756 aa18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 IDH1O75874 414 aaKnown RBP18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 MCCP23508 829 aa18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 LRP2BPQ9P2M1 347 aa18.24■□□□□ 0.51
TMEM39A-203ENST00000461654 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 ANP32AP39687 249 aaKnown RBP18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 GRM1Q13255 1194 aa18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 TNS4Q8IZW8 715 aa18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 BEGAINQ9BUH8 593 aa18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 PIH1D3Q9NQM4 214 aaKnown RBP18.23■□□□□ 0.51
TMEM39A-203ENST00000461654 CA12O43570 354 aa18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 HSPA8P11142 646 aaKnown RBP18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 SPTY2D1Q68D10 685 aaPredicted RBP18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 APOBEC3FQ8IUX4 373 aaKnown RBP18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 WDR66Q8TBY9 1149 aa18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
TMEM39A-203ENST00000461654 LBX1P52954 281 aa18.21■□□□□ 0.51
TMEM39A-203ENST00000461654 CHAF1AQ13111 956 aaPredicted RBP18.21■□□□□ 0.51
TMEM39A-203ENST00000461654 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
TMEM39A-203ENST00000461654 SLC9C2Q5TAH2 1124 aa18.21■□□□□ 0.51
TMEM39A-203ENST00000461654 ABCF2Q9UG63 623 aa18.21■□□□□ 0.51
TMEM39A-203ENST00000461654 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 IGSF3O75054 1194 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 ZNF157P51786 506 aaPredicted RBP18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 UBE3CQ15386 1083 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 MFSD14BQ5SR56 506 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 APPBP2Q92624 585 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 USP26Q9BXU7 913 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 RAI14Q9P0K7 980 aa18.2■□□□□ 0.5
TMEM39A-203ENST00000461654 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 ADD2P35612 726 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 CFAP100Q494V2 611 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 TMED8Q6PL24 325 aaPredicted RBP18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 PRMT6Q96LA8 375 aaPredicted RBP18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 SERPINA10Q9UK55 444 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 PPP2R3BQ9Y5P8 575 aa18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 COL1A1P02452 1464 aaPredicted RBP18.19■□□□□ 0.5
TMEM39A-203ENST00000461654 PAPPA2Q9BXP8 1791 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 MYO1BO43795 1136 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 SLC10A3P09131 477 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 PDE6AP16499 860 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 NF2P35240 595 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 ZIC5Q96T25 663 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 DEFB129Q9H1M3 183 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 JAG2Q9Y219 1238 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 CCDC171Q6TFL3 1326 aa18.18■□□□□ 0.5
TMEM39A-203ENST00000461654 F8W031 263 aaPredicted RBP18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 MAGEB6Q8N7X4 407 aa18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 MRIQ9BWK5 157 aa18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 TTF2Q9UNY4 1162 aaKnown RBP18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 ZNF532Q9HCE3 1301 aa18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 SALL1Q9NSC2 1324 aa18.17■□□□□ 0.5
TMEM39A-203ENST00000461654 HDLBPQ00341 1268 aaKnown RBP18.16■□□□□ 0.5
TMEM39A-203ENST00000461654 KIF23Q02241 960 aaPredicted RBP18.16■□□□□ 0.5
TMEM39A-203ENST00000461654 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms