RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 PRDX5P30044 214 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 HDLBPQ00341 1268 aaKnown RBP12.41□□□□□ -0.42
SYN3-206ENST00000461446 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 B4GALNT3Q6L9W6 998 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 APOBEC3HQ6NTF7 200 aaKnown RBP12.41□□□□□ -0.42
SYN3-206ENST00000461446 ARMC9Q7Z3E5 817 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 ZDHHC15Q96MV8 337 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 CSRNP1Q96S65 589 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
SYN3-206ENST00000461446 DENND2AQ9ULE3 1009 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 PPP2R3BQ9Y5P8 575 aa12.41□□□□□ -0.42
SYN3-206ENST00000461446 NUCB1Q02818 461 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 RASGRF1Q13972 1273 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 LDLRAD1Q5T700 205 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 MRIQ9BWK5 157 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
SYN3-206ENST00000461446 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
SYN3-206ENST00000461446 MCAMP43121 646 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 SUPT20HL1Q3ZLR7 823 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 TEPSINQ96N21 525 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 DAGLAQ9Y4D2 1042 aa12.39□□□□□ -0.43
SYN3-206ENST00000461446 MAST3O60307 1309 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 CA12O43570 354 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
SYN3-206ENST00000461446 USP2O75604 605 aaPredicted RBP12.38□□□□□ -0.43
SYN3-206ENST00000461446 TRPA1O75762 1119 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 CAPN15O75808 1086 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
SYN3-206ENST00000461446 ATP5JP18859 108 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 PI16Q6UXB8 463 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
SYN3-206ENST00000461446 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 RNF186Q9NXI6 227 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 ABCF2Q9UG63 623 aa12.38□□□□□ -0.43
SYN3-206ENST00000461446 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 CENPQQ7L2Z9 268 aaPredicted RBP12.37□□□□□ -0.43
SYN3-206ENST00000461446 ZGPATQ8N5A5 531 aaKnown RBP12.37□□□□□ -0.43
SYN3-206ENST00000461446 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
SYN3-206ENST00000461446 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
SYN3-206ENST00000461446 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 CYP2E1P05181 493 aaPredicted RBP12.36□□□□□ -0.43
SYN3-206ENST00000461446 MX1P20591 662 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 ZAP70P43403 619 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 TNNI2P48788 182 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 TCP10Q12799 353 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 CDC42EP5Q6NZY7 148 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 TMOD2Q9NZR1 351 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 STAP2Q9UGK3 403 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
SYN3-206ENST00000461446 AKAP11Q9UKA4 1901 aa12.35□□□□□ -0.43
SYN3-206ENST00000461446 IREB2P48200 963 aaKnown RBP12.35□□□□□ -0.43
SYN3-206ENST00000461446 NFIAQ12857 509 aa12.35□□□□□ -0.43
SYN3-206ENST00000461446 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
SYN3-206ENST00000461446 DZIP1Q86YF9 867 aaKnown RBP12.35□□□□□ -0.43
SYN3-206ENST00000461446 HAUS7Q99871 368 aa12.35□□□□□ -0.43
SYN3-206ENST00000461446 USP40Q9NVE5 1235 aa12.35□□□□□ -0.43
SYN3-206ENST00000461446 GJA5P36382 358 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 PDE1AP54750 535 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 FKBP1CQ5VVH2 108 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 TSHZ3Q63HK5 1081 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.34□□□□□ -0.43
SYN3-206ENST00000461446 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 PI4K2BQ8TCG2 481 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 CNKSR2Q8WXI2 1034 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 ANTXR1Q9H6X2 564 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 SAGE1Q9NXZ1 904 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
SYN3-206ENST00000461446 ERC2O15083 957 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 IGSF3O75054 1194 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
SYN3-206ENST00000461446 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 TM4SF4P48230 202 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 MECOMQ03112 1051 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 ERICH6Q7L0X2 663 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 MIGA2Q7L4E1 593 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
SYN3-206ENST00000461446 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms