RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 SLC4A2P04920 1241 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 BMP8BP34820 402 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 GYG1P46976 350 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 HDLBPQ00341 1268 aaKnown RBP16.18■□□□□ 0.18
C9orf78-202ENST00000461349 G2E3Q7L622 706 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
C9orf78-202ENST00000461349 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
C9orf78-202ENST00000461349 APAF1O14727 1248 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 FOXO4P98177 505 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
C9orf78-202ENST00000461349 UBE4AQ14139 1066 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 FKBP1CQ5VVH2 108 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 VPS37DQ86XT2 251 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
C9orf78-202ENST00000461349 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
C9orf78-202ENST00000461349 INHAP05111 366 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 FLIIQ13045 1269 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 Q7L0L9 218 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 PAWRQ96IZ0 340 aaKnown RBP16.16■□□□□ 0.18
C9orf78-202ENST00000461349 ZNF594Q96JF6 807 aaPredicted RBP16.16■□□□□ 0.18
C9orf78-202ENST00000461349 FAM84BQ96KN1 310 aaPredicted RBP16.16■□□□□ 0.18
C9orf78-202ENST00000461349 GDF15Q99988 308 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 GABRQQ9UN88 632 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
C9orf78-202ENST00000461349 BCRP11274 1271 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 ELNP15502 786 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 INPP5BP32019 993 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 FLT3LGP49771 235 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 COL25A1Q9BXS0 654 aaPredicted RBP16.15■□□□□ 0.18
C9orf78-202ENST00000461349 MAST3O60307 1309 aa16.15■□□□□ 0.18
C9orf78-202ENST00000461349 CYP2C8P10632 490 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
C9orf78-202ENST00000461349 TWISTNBQ3B726 338 aaPredicted RBP16.14■□□□□ 0.17
C9orf78-202ENST00000461349 LRIT3Q3SXY7 679 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 PAK6Q9NQU5 681 aaPredicted RBP16.14■□□□□ 0.17
C9orf78-202ENST00000461349 MTMR10Q9NXD2 777 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 DOCK3Q8IZD9 2030 aa16.14■□□□□ 0.17
C9orf78-202ENST00000461349 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
C9orf78-202ENST00000461349 PTPRFP10586 1907 aa16.13■□□□□ 0.17
C9orf78-202ENST00000461349 TNPO2O14787 897 aaKnown RBP16.13■□□□□ 0.17
C9orf78-202ENST00000461349 GRIK5Q16478 980 aa16.13■□□□□ 0.17
C9orf78-202ENST00000461349 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
C9orf78-202ENST00000461349 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
C9orf78-202ENST00000461349 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
C9orf78-202ENST00000461349 ZMYND8Q9ULU4 1186 aaPredicted RBP16.13■□□□□ 0.17
C9orf78-202ENST00000461349 IQSEC3Q9UPP2 1182 aaPredicted RBP16.13■□□□□ 0.17
C9orf78-202ENST00000461349 BCAMP50895 628 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 IRF5Q13568 498 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 MOGSQ13724 837 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
C9orf78-202ENST00000461349 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 MRIQ9BWK5 157 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 CRISPLD2Q9H0B8 497 aa16.12■□□□□ 0.17
C9orf78-202ENST00000461349 CXCL11O14625 94 aa16.11■□□□□ 0.17
C9orf78-202ENST00000461349 CAVIN4Q5BKX8 364 aa16.11■□□□□ 0.17
C9orf78-202ENST00000461349 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
C9orf78-202ENST00000461349 FAM151AQ8WW52 585 aa16.11■□□□□ 0.17
C9orf78-202ENST00000461349 NOL9Q5SY16 702 aaKnown RBP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 APOBEC3HQ6NTF7 200 aaKnown RBP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
C9orf78-202ENST00000461349 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 DIS3LQ8TF46 1054 aaKnown RBP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 COA7Q96BR5 231 aa16.1■□□□□ 0.17
C9orf78-202ENST00000461349 UBE2OQ9C0C9 1292 aaKnown RBP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
C9orf78-202ENST00000461349 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
C9orf78-202ENST00000461349 SYN1P17600 705 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
C9orf78-202ENST00000461349 HHIPL2Q6UWX4 724 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 MROH5Q6ZUA9 1318 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 DOCK1Q14185 1865 aa16.09■□□□□ 0.17
C9orf78-202ENST00000461349 GRM8O00222 908 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 EPHA10Q5JZY3 1008 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 GADL1Q6ZQY3 521 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 FBXO33Q7Z6M2 555 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.16
C9orf78-202ENST00000461349 TCP10Q12799 353 aa16.07■□□□□ 0.16
C9orf78-202ENST00000461349 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
C9orf78-202ENST00000461349 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
C9orf78-202ENST00000461349 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
C9orf78-202ENST00000461349 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
C9orf78-202ENST00000461349 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
C9orf78-202ENST00000461349 BEND3Q5T5X7 828 aa16.06■□□□□ 0.16
C9orf78-202ENST00000461349 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
C9orf78-202ENST00000461349 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
C9orf78-202ENST00000461349 ZHX2Q9Y6X8 837 aa16.06■□□□□ 0.16
C9orf78-202ENST00000461349 HMGCRP04035 888 aa16.05■□□□□ 0.16
C9orf78-202ENST00000461349 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms