RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 CTNNA3Q9UI47 895 aa14.79□□□□□ -0.04
HDAC4-206ENST00000460235 CCDC171Q6TFL3 1326 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 GPAA1O43292 621 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
HDAC4-206ENST00000460235 EPHX2P34913 555 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 USP5P45974 858 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 APOBEC3FQ8IUX4 373 aaKnown RBP14.78□□□□□ -0.04
HDAC4-206ENST00000460235 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 AATFQ9NY61 560 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC4-206ENST00000460235 TAOK2Q9UL54 1235 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 AK9Q5TCS8 1911 aa14.78□□□□□ -0.04
HDAC4-206ENST00000460235 SGSM2O43147 1006 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 MBD4O95243 580 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 APPP05067 770 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 GRIK5Q16478 980 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 RBM26Q5T8P6 1007 aaKnown RBP14.77□□□□□ -0.05
HDAC4-206ENST00000460235 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.05
HDAC4-206ENST00000460235 MIGA1Q8NAN2 632 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 OSBP2Q969R2 916 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 DCPSQ96C86 337 aaKnown RBP14.77□□□□□ -0.05
HDAC4-206ENST00000460235 ESYT1Q9BSJ8 1104 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 DOCK2Q92608 1830 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 MAST2Q6P0Q8 1798 aa14.77□□□□□ -0.05
HDAC4-206ENST00000460235 PITPNM2Q9BZ72 1349 aa14.76□□□□□ -0.05
HDAC4-206ENST00000460235 PATL2C9JE40 543 aaKnown RBP14.76□□□□□ -0.05
HDAC4-206ENST00000460235 WNT10BO00744 389 aa14.76□□□□□ -0.05
HDAC4-206ENST00000460235 EPS15P42566 896 aa14.76□□□□□ -0.05
HDAC4-206ENST00000460235 TBC1D10BQ4KMP7 808 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-206ENST00000460235 FAM227BQ96M60 508 aa14.76□□□□□ -0.05
HDAC4-206ENST00000460235 STRBPQ96SI9 672 aaKnown RBP14.76□□□□□ -0.05
HDAC4-206ENST00000460235 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
HDAC4-206ENST00000460235 SLC4A4Q9Y6R1 1079 aa14.76□□□□□ -0.05
HDAC4-206ENST00000460235 MYH7P12883 1935 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 A0A0D9SFI3 127 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 ENTPD3O75355 529 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 MCCP23508 829 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 CDC42EP5Q6NZY7 148 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 FAM83AQ86UY5 434 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 PRMT6Q96LA8 375 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 RIOK1Q9BRS2 568 aaKnown RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 DSCC1Q9BVC3 393 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 TAF1DQ9H5J8 278 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 ARMT1Q9H993 441 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 GPBP1L1Q9HC44 474 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 ZNF70Q9UC06 446 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-206ENST00000460235 PPP2R3BQ9Y5P8 575 aa14.75□□□□□ -0.05
HDAC4-206ENST00000460235 SCN4AP35499 1836 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 SULF1Q8IWU6 871 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 ZNF384Q8TF68 577 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 ZBED3Q96IU2 234 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-206ENST00000460235 NAPBQ9H115 298 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
HDAC4-206ENST00000460235 VEZTQ9HBM0 779 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 ZNF287Q9HBT7 754 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 ANO2Q9NQ90 1003 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-206ENST00000460235 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
HDAC4-206ENST00000460235 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 M0R2C6 588 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 HLA-DOAP06340 250 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 TDO2P48775 406 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 NT5C2P49902 561 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 ALX1Q15699 326 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 EAPPQ56P03 285 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-206ENST00000460235 ADGRA1Q86SQ6 560 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 LCORLQ8N3X6 602 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 SH3RF3Q8TEJ3 882 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-206ENST00000460235 TGFBRAP1Q8WUH2 860 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 RRAGCQ9HB90 399 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 ARPP21Q9UBL0 812 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-206ENST00000460235 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
HDAC4-206ENST00000460235 ZMYM6O95789 1325 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-206ENST00000460235 YY1P25490 414 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 RHBDL3P58872 404 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 DYNLL1P63167 89 aaKnown RBP14.72□□□□□ -0.05
HDAC4-206ENST00000460235 NBPF9Q3BBW0 867 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 LDHDQ86WU2 507 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 ZSCAN29Q8IWY8 852 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-206ENST00000460235 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 TRIM34Q9BYJ4 488 aa14.72□□□□□ -0.05
HDAC4-206ENST00000460235 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.05
HDAC4-206ENST00000460235 PCP11498 1178 aaKnown RBP14.71□□□□□ -0.05
HDAC4-206ENST00000460235 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-206ENST00000460235 NF2P35240 595 aa14.71□□□□□ -0.05
HDAC4-206ENST00000460235 IMMTQ16891 758 aaKnown RBP14.71□□□□□ -0.05
HDAC4-206ENST00000460235 SUPT20HL1Q3ZLR7 823 aa14.71□□□□□ -0.05
HDAC4-206ENST00000460235 CDC37L1Q7L3B6 337 aa14.71□□□□□ -0.05
HDAC4-206ENST00000460235 IFNL3Q8IZI9 196 aa14.71□□□□□ -0.05
HDAC4-206ENST00000460235 SEC62Q99442 399 aaKnown RBP14.71□□□□□ -0.05
HDAC4-206ENST00000460235 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
HDAC4-206ENST00000460235 PGAP2Q9UHJ9 254 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms