RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 CFAP100Q494V2 611 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 NAA16Q6N069 864 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-211ENST00000460176 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-211ENST00000460176 SAMD7Q7Z3H4 446 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 TRPM4Q8TD43 1214 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-211ENST00000460176 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-211ENST00000460176 ZBED3Q96IU2 234 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-211ENST00000460176 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
GARNL3-211ENST00000460176 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 RNF113AO15541 343 aaKnown RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 EPHX2P34913 555 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 DLGAP5Q15398 846 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 TBC1D10BQ4KMP7 808 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 TAF1DQ9H5J8 278 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 RRAGCQ9HB90 399 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 NMRK2Q9NPI5 230 aa12.38□□□□□ -0.43
GARNL3-211ENST00000460176 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
GARNL3-211ENST00000460176 GPR75-ASB3A0A0A6YYF3 556 aa12.37□□□□□ -0.43
GARNL3-211ENST00000460176 LDHCP07864 332 aa12.37□□□□□ -0.43
GARNL3-211ENST00000460176 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 YY1P25490 414 aa12.37□□□□□ -0.43
GARNL3-211ENST00000460176 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 APOBEC3HQ6NTF7 200 aaKnown RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 APPBP2Q92624 585 aa12.37□□□□□ -0.43
GARNL3-211ENST00000460176 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-211ENST00000460176 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 WNT10BO00744 389 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 BTDP43251 543 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 RHBDL3P58872 404 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 ZMYM1Q5SVZ6 1142 aa12.36□□□□□ -0.43
GARNL3-211ENST00000460176 USP50Q70EL3 339 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-211ENST00000460176 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
GARNL3-211ENST00000460176 A0A0D9SFI3 127 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 PPP4CP60510 307 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
GARNL3-211ENST00000460176 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
GARNL3-211ENST00000460176 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 MIGA1Q8NAN2 632 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 FAM227BQ96M60 508 aa12.35□□□□□ -0.43
GARNL3-211ENST00000460176 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
GARNL3-211ENST00000460176 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
GARNL3-211ENST00000460176 AATFQ9NY61 560 aaKnown RBP eCLIP12.35□□□□□ -0.43
GARNL3-211ENST00000460176 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 M0R2C6 588 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 HIP1O00291 1037 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 MBD4O95243 580 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 BAG3O95817 575 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 CHMLP26374 656 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 SEC62Q99442 399 aaKnown RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 USP40Q9NVE5 1235 aa12.34□□□□□ -0.43
GARNL3-211ENST00000460176 ZNF70Q9UC06 446 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-211ENST00000460176 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 KIF3CO14782 793 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 EAPPQ56P03 285 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-211ENST00000460176 NOL10Q9BSC4 688 aaKnown RBP12.33□□□□□ -0.44
GARNL3-211ENST00000460176 IL25Q9H293 177 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 ARMT1Q9H993 441 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 LAMB1P07942 1786 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 MYH1P12882 1939 aa12.33□□□□□ -0.44
GARNL3-211ENST00000460176 BAZ2AQ9UIF9 1905 aaKnown RBP12.33□□□□□ -0.44
GARNL3-211ENST00000460176 GPAA1O43292 621 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 MYO1BO43795 1136 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CDC45O75419 566 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CACNB3P54284 484 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 MCMDC2Q4G0Z9 681 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 ANGEL2Q5VTE6 544 aaKnown RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CWC27Q6UX04 472 aaKnown RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 CERS3Q8IU89 383 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 TEX11Q8IYF3 940 aa12.32□□□□□ -0.44
GARNL3-211ENST00000460176 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 STRBPQ96SI9 672 aaKnown RBP12.32□□□□□ -0.44
GARNL3-211ENST00000460176 GGA3Q9NZ52 723 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms