RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SLC10A3P09131 477 aa25.39■■□□□ 1.66
VARS-218ENST00000459667 CDC42EP5Q6NZY7 148 aa25.39■■□□□ 1.66
VARS-218ENST00000459667 TEPSINQ96N21 525 aa25.39■■□□□ 1.66
VARS-218ENST00000459667 CRBNQ96SW2 442 aa25.39■■□□□ 1.66
VARS-218ENST00000459667 RAI14Q9P0K7 980 aa25.39■■□□□ 1.66
VARS-218ENST00000459667 PCNTO95613 3336 aa25.39■■□□□ 1.65
VARS-218ENST00000459667 PPP1R12BO60237 982 aaPredicted RBP25.38■■□□□ 1.65
VARS-218ENST00000459667 FAM83AQ86UY5 434 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 RASAL3Q86YV0 1011 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 CDAN1Q8IWY9 1227 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 WBP1LQ9NX94 342 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 LRP2BPQ9P2M1 347 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 MAST2Q6P0Q8 1798 aa25.38■■□□□ 1.65
VARS-218ENST00000459667 MROH7-TTC4A0A0A0MT08 1334 aa25.37■■□□□ 1.65
VARS-218ENST00000459667 ZAP70P43403 619 aa25.37■■□□□ 1.65
VARS-218ENST00000459667 AIDAQ96BJ3 306 aa25.37■■□□□ 1.65
VARS-218ENST00000459667 NSUN4Q96CB9 384 aaKnown RBP25.37■■□□□ 1.65
VARS-218ENST00000459667 FAM163AQ96GL9 167 aaPredicted RBP25.37■■□□□ 1.65
VARS-218ENST00000459667 BCL11AQ9H165 835 aa25.37■■□□□ 1.65
VARS-218ENST00000459667 USP40Q9NVE5 1235 aa25.37■■□□□ 1.65
VARS-218ENST00000459667 CYP2E1P05181 493 aaPredicted RBP25.36■■□□□ 1.65
VARS-218ENST00000459667 IFIT2P09913 472 aaKnown RBP25.36■■□□□ 1.65
VARS-218ENST00000459667 BTDP43251 543 aa25.36■■□□□ 1.65
VARS-218ENST00000459667 GSTO1P78417 241 aa25.36■■□□□ 1.65
VARS-218ENST00000459667 MAP3K11Q16584 847 aa25.36■■□□□ 1.65
VARS-218ENST00000459667 ZNF384Q8TF68 577 aa25.36■■□□□ 1.65
VARS-218ENST00000459667 ZIC5Q96T25 663 aa25.36■■□□□ 1.65
VARS-218ENST00000459667 RPAP1Q9BWH6 1393 aaPredicted RBP25.35■■□□□ 1.65
VARS-218ENST00000459667 LDHCP07864 332 aa25.35■■□□□ 1.65
VARS-218ENST00000459667 LDLRAD1Q5T700 205 aa25.35■■□□□ 1.65
VARS-218ENST00000459667 PCDHB15Q9Y5E8 787 aa25.35■■□□□ 1.65
VARS-218ENST00000459667 IREB2P48200 963 aaKnown RBP25.34■■□□□ 1.65
VARS-218ENST00000459667 NFIAQ12857 509 aa25.34■■□□□ 1.65
VARS-218ENST00000459667 LRRCC1Q9C099 1032 aa25.34■■□□□ 1.65
VARS-218ENST00000459667 MYO5AQ9Y4I1 1855 aaKnown RBP25.34■■□□□ 1.65
VARS-218ENST00000459667 FOXN1O15353 648 aa25.33■■□□□ 1.65
VARS-218ENST00000459667 USP2O75604 605 aaPredicted RBP25.33■■□□□ 1.65
VARS-218ENST00000459667 FAM151AQ8WW52 585 aa25.33■■□□□ 1.65
VARS-218ENST00000459667 BEGAINQ9BUH8 593 aa25.33■■□□□ 1.65
VARS-218ENST00000459667 DCTPP1Q9H773 170 aa25.33■■□□□ 1.65
VARS-218ENST00000459667 GPR75-ASB3A0A0A6YYF3 556 aa25.32■■□□□ 1.64
VARS-218ENST00000459667 KIF23Q02241 960 aaPredicted RBP25.32■■□□□ 1.64
VARS-218ENST00000459667 TCP10Q12799 353 aa25.32■■□□□ 1.64
VARS-218ENST00000459667 PIH1D3Q9NQM4 214 aaKnown RBP25.32■■□□□ 1.64
VARS-218ENST00000459667 NDUFB9Q9Y6M9 179 aa25.32■■□□□ 1.64
VARS-218ENST00000459667 OTOFQ9HC10 1997 aa25.32■■□□□ 1.64
VARS-218ENST00000459667 NAA16Q6N069 864 aaPredicted RBP25.31■■□□□ 1.64
VARS-218ENST00000459667 IDI2Q9BXS1 227 aa25.31■■□□□ 1.64
VARS-218ENST00000459667 FAM198AQ9UFP1 575 aa25.31■■□□□ 1.64
VARS-218ENST00000459667 RFX7Q2KHR2 1363 aa25.31■■□□□ 1.64
VARS-218ENST00000459667 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
VARS-218ENST00000459667 SMARCA5O60264 1052 aaPredicted RBP25.3■■□□□ 1.64
VARS-218ENST00000459667 HOOK2Q96ED9 719 aa25.3■■□□□ 1.64
VARS-218ENST00000459667 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.3■■□□□ 1.64
VARS-218ENST00000459667 AK9Q5TCS8 1911 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 DOCK2Q92608 1830 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 IGSF3O75054 1194 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 RGS3P49796 1198 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 ANKRD13AQ8IZ07 590 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 SLC10A4Q96EP9 437 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 CLMNQ96JQ2 1002 aa25.29■■□□□ 1.64
VARS-218ENST00000459667 ENTPD3O75355 529 aa25.28■■□□□ 1.64
VARS-218ENST00000459667 IDH1O75874 414 aaKnown RBP25.28■■□□□ 1.64
VARS-218ENST00000459667 CTCFP49711 727 aaPredicted RBP25.28■■□□□ 1.64
VARS-218ENST00000459667 RHBDL3P58872 404 aa25.28■■□□□ 1.64
VARS-218ENST00000459667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.28■■□□□ 1.64
VARS-218ENST00000459667 NOL10Q9BSC4 688 aaKnown RBP25.28■■□□□ 1.64
VARS-218ENST00000459667 ANTXR1Q9H6X2 564 aa25.28■■□□□ 1.64
VARS-218ENST00000459667 WDHD1O75717 1129 aaPredicted RBP25.27■■□□□ 1.64
VARS-218ENST00000459667 MKRN3Q13064 507 aaKnown RBP25.27■■□□□ 1.64
VARS-218ENST00000459667 PICALMQ13492 652 aa25.27■■□□□ 1.64
VARS-218ENST00000459667 DCAF15Q66K64 600 aa25.27■■□□□ 1.64
VARS-218ENST00000459667 MAP4K4O95819 1239 aaPredicted RBP25.26■■□□□ 1.63
VARS-218ENST00000459667 ZFPM1Q8IX07 1006 aa25.26■■□□□ 1.63
VARS-218ENST00000459667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.26■■□□□ 1.63
VARS-218ENST00000459667 CSRNP1Q96S65 589 aa25.26■■□□□ 1.63
VARS-218ENST00000459667 DDX4Q9NQI0 724 aaKnown RBP25.26■■□□□ 1.63
VARS-218ENST00000459667 SUPT16HQ9Y5B9 1047 aaKnown RBP25.26■■□□□ 1.63
VARS-218ENST00000459667 CA12O43570 354 aa25.25■■□□□ 1.63
VARS-218ENST00000459667 BAG3O95817 575 aa25.25■■□□□ 1.63
VARS-218ENST00000459667 TTF1Q15361 905 aaPredicted RBP25.25■■□□□ 1.63
VARS-218ENST00000459667 SPRYD7Q5W111 196 aa25.25■■□□□ 1.63
VARS-218ENST00000459667 ADGRA1Q86SQ6 560 aa25.25■■□□□ 1.63
VARS-218ENST00000459667 REM2Q8IYK8 340 aaPredicted RBP25.25■■□□□ 1.63
VARS-218ENST00000459667 DNAJC2Q99543 621 aaKnown RBP25.25■■□□□ 1.63
VARS-218ENST00000459667 AATFQ9NY61 560 aaKnown RBP eCLIP25.25■■□□□ 1.63
VARS-218ENST00000459667 HSPA8P11142 646 aaKnown RBP25.24■■□□□ 1.63
VARS-218ENST00000459667 CYP7A1P22680 504 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 MAP3K9P80192 1104 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 MAP3K12Q12852 859 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 AAMPQ13685 434 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.24■■□□□ 1.63
VARS-218ENST00000459667 MIGA2Q7L4E1 593 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 WNK4Q96J92 1243 aa25.24■■□□□ 1.63
VARS-218ENST00000459667 ZBTB48P10074 688 aaPredicted RBP25.23■■□□□ 1.63
VARS-218ENST00000459667 ATP5JP18859 108 aa25.23■■□□□ 1.63
VARS-218ENST00000459667 LBX1P52954 281 aa25.23■■□□□ 1.63
VARS-218ENST00000459667 VGLL4Q14135 290 aa25.23■■□□□ 1.63
VARS-218ENST00000459667 ZSCAN29Q8IWY8 852 aaPredicted RBP25.23■■□□□ 1.63
VARS-218ENST00000459667 TEX11Q8IYF3 940 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms