RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 LDLRAD1Q5T700 205 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 SIRT2Q8IXJ6 389 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
NECAP2-204ENST00000459640 SNRKQ9NRH2 765 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 DBNLQ9UJU6 430 aaKnown RBP17.33■□□□□ 0.36
NECAP2-204ENST00000459640 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.36
NECAP2-204ENST00000459640 USP2O75604 605 aaPredicted RBP17.32■□□□□ 0.36
NECAP2-204ENST00000459640 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
NECAP2-204ENST00000459640 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
NECAP2-204ENST00000459640 EAF2Q96CJ1 260 aaPredicted RBP17.32■□□□□ 0.36
NECAP2-204ENST00000459640 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 MECOMQ03112 1051 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 TCP10Q12799 353 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 MAP3K11Q16584 847 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 CCDC158Q5M9N0 1113 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
NECAP2-204ENST00000459640 RPAP2Q8IXW5 612 aaPredicted RBP17.31■□□□□ 0.36
NECAP2-204ENST00000459640 CSRNP1Q96S65 589 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
NECAP2-204ENST00000459640 GAKO14976 1311 aa17.3■□□□□ 0.36
NECAP2-204ENST00000459640 IREB2P48200 963 aaKnown RBP17.3■□□□□ 0.36
NECAP2-204ENST00000459640 NFIAQ12857 509 aa17.3■□□□□ 0.36
NECAP2-204ENST00000459640 FAM83AQ86UY5 434 aa17.3■□□□□ 0.36
NECAP2-204ENST00000459640 ERC1Q8IUD2 1116 aa17.3■□□□□ 0.36
NECAP2-204ENST00000459640 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
NECAP2-204ENST00000459640 CHMP4BQ9H444 224 aaKnown RBP17.3■□□□□ 0.36
NECAP2-204ENST00000459640 MROH7-TTC4A0A0A0MT08 1334 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 HMMRO75330 724 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 BTDP43251 543 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 FKBP1CQ5VVH2 108 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 AACSQ86V21 672 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 SLC10A4Q96EP9 437 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
NECAP2-204ENST00000459640 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
NECAP2-204ENST00000459640 CA12O43570 354 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 HSP90AB4PQ58FF6 505 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 SPRYD7Q5W111 196 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 RNF186Q9NXI6 227 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 LRP2BPQ9P2M1 347 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
NECAP2-204ENST00000459640 FOCADQ5VW36 1801 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 TRPA1O75762 1119 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 ZAP70P43403 619 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
NECAP2-204ENST00000459640 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 SLF2Q8IX21 1173 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 ANKRD13AQ8IZ07 590 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.36
NECAP2-204ENST00000459640 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 NDUFB9Q9Y6M9 179 aa17.27■□□□□ 0.36
NECAP2-204ENST00000459640 RFX7Q2KHR2 1363 aa17.27■□□□□ 0.35
NECAP2-204ENST00000459640 CYP2E1P05181 493 aaPredicted RBP17.26■□□□□ 0.35
NECAP2-204ENST00000459640 GJA5P36382 358 aa17.26■□□□□ 0.35
NECAP2-204ENST00000459640 RGS3P49796 1198 aa17.26■□□□□ 0.35
NECAP2-204ENST00000459640 MIGA2Q7L4E1 593 aa17.26■□□□□ 0.35
NECAP2-204ENST00000459640 FAM151AQ8WW52 585 aa17.26■□□□□ 0.35
NECAP2-204ENST00000459640 FAM163AQ96GL9 167 aaPredicted RBP17.26■□□□□ 0.35
NECAP2-204ENST00000459640 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
NECAP2-204ENST00000459640 GSTO1P78417 241 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 PICALMQ13492 652 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 VGLL4Q14135 290 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.25■□□□□ 0.35
NECAP2-204ENST00000459640 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
NECAP2-204ENST00000459640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.35
NECAP2-204ENST00000459640 CNKSR2Q8WXI2 1034 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 KIF1BPQ96EK5 621 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 ZNF512BQ96KM6 892 aaPredicted RBP17.25■□□□□ 0.35
NECAP2-204ENST00000459640 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
NECAP2-204ENST00000459640 SAGE1Q9NXZ1 904 aa17.25■□□□□ 0.35
NECAP2-204ENST00000459640 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
NECAP2-204ENST00000459640 WDHD1O75717 1129 aaPredicted RBP17.24■□□□□ 0.35
NECAP2-204ENST00000459640 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
NECAP2-204ENST00000459640 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
NECAP2-204ENST00000459640 WRNIP1Q96S55 665 aa17.24■□□□□ 0.35
NECAP2-204ENST00000459640 UNCXA6NJT0 531 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 LDHCP07864 332 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
NECAP2-204ENST00000459640 TM4SF4P48230 202 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 RHBDL3P58872 404 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 SREBF2Q12772 1141 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 DCAF15Q66K64 600 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 NAA16Q6N069 864 aaPredicted RBP17.23■□□□□ 0.35
NECAP2-204ENST00000459640 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
NECAP2-204ENST00000459640 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
NECAP2-204ENST00000459640 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 CSADQ9Y600 493 aa17.23■□□□□ 0.35
NECAP2-204ENST00000459640 SIPA1L1O43166 1804 aa17.22■□□□□ 0.35
NECAP2-204ENST00000459640 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
NECAP2-204ENST00000459640 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
NECAP2-204ENST00000459640 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
NECAP2-204ENST00000459640 SH3BP5LQ7L8J4 393 aa17.22■□□□□ 0.35
NECAP2-204ENST00000459640 ADGRA1Q86SQ6 560 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms