RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ATRNL1Q5VV63 1379 aa14.97□□□□□ -0.01
LMCD1-206ENST00000456506 PTPRCP08575 1304 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 CETPP11597 493 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 ATG9AQ7Z3C6 839 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 VPS37DQ86XT2 251 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 ZNF112Q9UJU3 913 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
LMCD1-206ENST00000456506 CEP290O15078 2479 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 MAST3O60307 1309 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 MYO5AQ9Y4I1 1855 aaKnown RBP14.95□□□□□ -0.02
LMCD1-206ENST00000456506 SIPA1L1O43166 1804 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 ANP32CO43423 234 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
LMCD1-206ENST00000456506 SLC9C1Q4G0N8 1177 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 C17orf99Q6UX52 265 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 RFX7Q2KHR2 1363 aa14.95□□□□□ -0.02
LMCD1-206ENST00000456506 PLXNB2O15031 1838 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 EYA2O00167 538 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 INPP5BP32019 993 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
LMCD1-206ENST00000456506 PPATQ06203 517 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 FAM9BQ8IZU0 186 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 SH3TC2Q8TF17 1288 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 KCNH4Q9UQ05 1017 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 DAGLAQ9Y4D2 1042 aa14.94□□□□□ -0.02
LMCD1-206ENST00000456506 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
LMCD1-206ENST00000456506 ZBTB22O15209 634 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 NFIAQ12857 509 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 ARHGEF6Q15052 776 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 CDC42EP5Q6NZY7 148 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 MIGA2Q7L4E1 593 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 LPIN2Q92539 896 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 SHISA4Q96DD7 197 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 TMEM106CQ9BVX2 250 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 TMOD2Q9NZR1 351 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
LMCD1-206ENST00000456506 FRAT2O75474 233 aaPredicted RBP14.92□□□□□ -0.02
LMCD1-206ENST00000456506 GNRH1P01148 92 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
LMCD1-206ENST00000456506 PRDX5P30044 214 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 DIXDC1Q155Q3 683 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 NOL9Q5SY16 702 aaKnown RBP14.92□□□□□ -0.02
LMCD1-206ENST00000456506 DCAF15Q66K64 600 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 ANKRD23Q86SG2 305 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 NBPF11Q86T75 865 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.92□□□□□ -0.02
LMCD1-206ENST00000456506 HOOK2Q96ED9 719 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 SALL1Q9NSC2 1324 aa14.92□□□□□ -0.02
LMCD1-206ENST00000456506 PRMT2P55345 433 aa14.91□□□□□ -0.02
LMCD1-206ENST00000456506 UBE2Q1Q7Z7E8 422 aa14.91□□□□□ -0.02
LMCD1-206ENST00000456506 ZFPM1Q8IX07 1006 aa14.91□□□□□ -0.02
LMCD1-206ENST00000456506 WDR66Q8TBY9 1149 aa14.91□□□□□ -0.02
LMCD1-206ENST00000456506 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
LMCD1-206ENST00000456506 MAST2Q6P0Q8 1798 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 SLC5A1P13866 664 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 MTFR1Q15390 333 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 GPAT2Q6NUI2 795 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 SRRDQ9UH36 339 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 CPA4Q9UI42 421 aa14.9□□□□□ -0.02
LMCD1-206ENST00000456506 PDHXO00330 501 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 MYCP01106 439 aaPredicted RBP14.89□□□□□ -0.03
LMCD1-206ENST00000456506 BCRP11274 1271 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 OSBPP22059 807 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 TCP10Q12799 353 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 SLC4A8Q2Y0W8 1093 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 SH3BP5LQ7L8J4 393 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 TRIOBPQ9H2D6 2365 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 GAKO14976 1311 aa14.89□□□□□ -0.03
LMCD1-206ENST00000456506 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
LMCD1-206ENST00000456506 H0YGN5 161 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 CIAO1O76071 339 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 PSMC4P43686 418 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 MAP3K10Q02779 954 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 KIF22Q14807 665 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 ALDH1L2Q3SY69 923 aa14.88□□□□□ -0.03
LMCD1-206ENST00000456506 TRMT2AQ8IZ69 625 aaKnown RBP14.88□□□□□ -0.03
LMCD1-206ENST00000456506 E9PSI1 815 aa14.87□□□□□ -0.03
LMCD1-206ENST00000456506 WDHD1O75717 1129 aaPredicted RBP14.87□□□□□ -0.03
LMCD1-206ENST00000456506 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
LMCD1-206ENST00000456506 PHKA1P46020 1223 aa14.87□□□□□ -0.03
LMCD1-206ENST00000456506 IDI2Q9BXS1 227 aa14.87□□□□□ -0.03
LMCD1-206ENST00000456506 ECM2O94769 699 aaPredicted RBP14.86□□□□□ -0.03
LMCD1-206ENST00000456506 ATP2B3Q16720 1220 aa14.86□□□□□ -0.03
LMCD1-206ENST00000456506 USP40Q9NVE5 1235 aa14.86□□□□□ -0.03
LMCD1-206ENST00000456506 FRMPD3Q5JV73 1810 aa14.86□□□□□ -0.03
LMCD1-206ENST00000456506 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
LMCD1-206ENST00000456506 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
LMCD1-206ENST00000456506 CXCL11O14625 94 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 SEMA3EO15041 775 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
LMCD1-206ENST00000456506 CYP2C8P10632 490 aa14.85□□□□□ -0.03
LMCD1-206ENST00000456506 ADORA1P30542 326 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms